Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-28 seq20 136 5e-27 seq1 84.2 3e-11 >seq3 Length=2330021 Score = 141 bits (156), Expect = 1e-28 Identities = 354/534 (66%), Gaps = 9/534 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | | || |||||||| || |||||||| ||| Sbjct 781185 CCCCAGCACATGCTCATGCGTGTTTCCGTTGGTATCCACGGTGATGACATTGAGAAGGTC 781244 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || ||| | | | |||| ||||| | || || |||||| Sbjct 781245 ATCGAGACCTACAACCTCATGAGCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 781304 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || | || || || | |||||||| |||||||| |||||| ||||||||| Sbjct 781305 AACTCGGGCACCCCCCACGCCCAGATGTCGTCCTGCTTCCTCGTCGCCATGAAGGAGGAC 781364 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || || |||||||||| | ||||| | | ||||| || ||||| ||| || || Sbjct 781365 TCCATTGACGGTATCTACGACACTCTCAAGACCTGTGCTCAGATCTCGAAGACTGCCGGT 781424 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACAA 75509 |||||||| | |||||||| | | | |||| | ||||| ||| || || | Sbjct 781425 GGTATTGGTCTCCACATCCACAACATTCGTGCCA--AGGGCTCGTACATTGCCGGAACCA 781482 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || | || | ||||| |||| |||||||| | | |||| || || || || | Sbjct 781483 ACGGCTACTCTAACGGTATCGTTCCCATGCTTCGTGCCTACGACGCTACCGCTCGTTACG 781542 Query 75570 TAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | | | || | ||| ||| ||| || |||| ||||| | || || ||||| Sbjct 781543 TTGA-CCAGGGTGGCAACAAGCGCCCGGGTGCCTTCGCCATCTACCTCGAGCCCTGGCAC 781601 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 ||||| ||| | || ||||| || | || ||||| || | || |||| ||| Sbjct 781602 GCCGACATCTTCGACTTCCTGGACCTCCGTAAGAACCATGGAAAGGAGGAGGTTCGTGCC 781661 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 | || ||||| | |||| ||||| | ||||| ||||||||||| || ||| Sbjct 781662 CGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 781715 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || |||||||| ||||| || ||| | ||| | ||| || || ||||| ||||| ||| Sbjct 337374 GGAGCCAAGATTCCCCGTGGTGCCATCCTCTCCGGTCCCCCGGGAACGGGTAAGACGCTC 337433 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 |||||| || | ||||| || | || || || ||| || | ||| || | | | Sbjct 337434 CTCGCCAAGGCGACGGCGGGCGAGGCCAAGGTTCCCTTCCTCTCTGTG-TCCGGATCCGA 337492 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||||||||||||||| ||||| ||| || | || ||||||||||| | | || Sbjct 337493 GTTTGTGGAGATGTTTGTCGGTGTCGGTCCCTCGCGTGTGCGCGATCTCTTCGCGA-CGG 337551 Query 175455 CCGCGAA-AATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG 175509 || ||| || || || || ||||||| || |||||||| || | |||||| Sbjct 337552 CCAAGAAGAACGCCCCCTGCATCATCTTCATCGACGAGATTGACGCCATCGGCAAG 337607 >seq20 Length=206136 Score = 136 bits (150), Expect = 5e-27 Identities = 240/342 (70%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 || |||| |||||||||| | || || || || ||||| ||||||||||| || || Sbjct 118065 TCGTTCGGCGAGCGCCTTATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCG 118124 Query 65128 TTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 || |||| | || | ||| | |||||||| ||||||||||| || || |||||| || Sbjct 118125 TT-TGCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAA 118183 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-A 65245 || || || || || || |||||||||||| || |||||| |||||||| | | Sbjct 118184 CGAGCTCATCTCGCGCGACGAGGGTCTCCACACCGACTTTGCCTGCCTGCTCTTCACGCA 118243 Query 65246 CTTTGCGTAATAGACC-CACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | || || | || ||| |||| || ||| || ||| | || |||||||| || Sbjct 118244 CCTT-CGCCGCCGCCCGCAC-CCCGACACGATCAACAAGATCATCAAGGAGGCGGTCAAG 118301 Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364 |||||| | | |||| || || || ||||| ||||| || |||||| | || Sbjct 118302 ATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATTGGCATGAACGCCAAG 118361 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTC 65406 |||| | |||||||||||| ||| | || || |||||| Sbjct 118362 CTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCTCCTC 118403 >seq1 Length=4053335 Score = 84.2 bits (92), Expect = 3e-11 Identities = 190/281 (68%), Gaps = 10/281 (4%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT--GGTGCCAAGATCC 175288 |||||||| || || ||| ||||||| |||| || | ||| || | ||| ||| Sbjct 270803 GAGATTGTCGAGTTCCTCC-GCAACCCC-GAGAAGTTCTCCAAGCTCGGCGGAAAGCTCC 270860 Query 175289 CCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCA 175348 || |||| ||| ||| | || ||| ||||| || ||||| |||||||| || |||| Sbjct 270861 CCAAGGGCGTCCTCCTCACCGGCCCGCCGGGTACTGGTAAGACGCTCCTCGCGCGCGCCA 270920 Query 175349 TCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAA---CTTTGTGGAGA 175405 |||| || || | | || || ||| || | | || ||| | ||| | |||| Sbjct 270921 TCGCCGGCGAGGCGGAGGTGCCCTTCTTC---TTCGCTTCCGGATCTGCCTTCGACGAGA 270977 Query 175406 TGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATC 175465 ||||||| ||||| |||||||| | || ||||| ||||| | || |||| || Sbjct 270978 TGTTTGTCGGTGTCGGTGCCAAGCGCGTGCGCGAGCTCTTCAAGGCTGCGCGCGCCAAGG 271037 Query 175466 AACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGC 175506 || ||||| |||||||| ||| | || || ||||| Sbjct 271038 CTCCCGCCATTGTTTTCATTGACGAGCTCGACGCCATGGGC 271078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569331543680