Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 140 2e-28 seq12 107 1e-18 seq1 104 2e-17 >seq3 Length=2330021 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||||||||| |||||||| || | || |||| Sbjct 20599 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCC 20540 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| || |||||||| || |||||||| | || | ||||||||||| Sbjct 20539 TCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 20480 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || |||||| || | || || ||| Sbjct 20479 TGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTC 20420 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 20419 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 20388 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| |||||||| || |||| | || Sbjct 20371 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 20312 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| || || || || |||||||| | || | ||||||||||| Sbjct 20311 TCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 20252 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | ||| || || | || || ||| Sbjct 20251 TGGATCTTCGACTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTC 20192 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| || ||||||||||| Sbjct 20191 TTACCCGTAAGGGTCTTGACGAAGATCTGCAT 20160 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || ||| |||| | || || || ||||| || || || Sbjct 20123 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 20064 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | ||||||||||| | || || |||||| Sbjct 20063 GATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 20004 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| || | || |||||||| || ||||| ||||| || Sbjct 20003 GTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCAC 19944 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 19943 AAAGATCTGCAT 19932 >seq12 Length=680385 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| |||||||| ||| |||| | || Sbjct 282029 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 281970 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| | || | ||||||||||| Sbjct 281969 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 281910 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| |||| || |||||| Sbjct 281909 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTC 281850 Query 34946 TTTCCCGTGAGG 34957 || ||||| ||| Sbjct 281849 TTGCCCGTCAGG 281838 >seq1 Length=4053335 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 1442492 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1442433 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 1442432 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1442373 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | || |||||| Sbjct 1442372 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTC 1442313 Query 34946 TTTCCCGTGAGG 34957 || || |||||| Sbjct 1442312 TTACCGGTGAGG 1442301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692657102284