Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=2330021 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| || ||||| ||||| |||| |||| || ||||||||||| Sbjct 20351 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAA 20292 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||||||||| || | || | ||| || ||||| || ||| ||| || | Sbjct 20291 AATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTC-ACGT 20233 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||| || || || || | ||||||||| ||||| || | || || | Sbjct 20232 TGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGA 20173 Query 33737 CAAAGATCTGCATA 33750 | |||||||||||| Sbjct 20172 CGAAGATCTGCATA 20159 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || ||||| || ||| | || |||| || Sbjct 20590 TGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGC 20531 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||| ||||| |||| |||||||| || | || | || || ||||| ||| ||| Sbjct 20530 TTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTC 20471 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| | | ||| | ||||| || || || || | ||||||||| || || || Sbjct 20470 GACTTCA-CGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGT 20412 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 20411 GAGGGTCTTGACGAAGATCTGCAT 20388 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || || ||| || || |||||||| ||||| Sbjct 20159 ACCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 20100 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || || ||||| || | ||||||||| || | || Sbjct 20099 CAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGG 20040 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| ||| || | | | ||| | ||||||| || || | Sbjct 20039 AATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCGATGGTGTCGGACGACTCGA 19981 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || |||||||||||||| Sbjct 19980 CCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 19932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703855781120