Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq20 228 1e-53 seq3 132 7e-25 seq5 129 8e-24 seq2 104 3e-16 seq14 89.7 7e-12 seq15 86.0 9e-11 >seq20 Length=206136 Score = 228 bits (252), Expect = 1e-53 Identities = 367/514 (71%), Gaps = 20/514 (4%) Strand=Plus/Plus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||| ||| | |||||| || ||||| ||||||| || ||||||||||||||| || Sbjct 117668 GCAGATCTGGCAGATGTAC-AAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCA 117726 Query 1455832 ACCTCGGCGCC-GACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 |||||| |||| ||| | |||||| ||||| |||| |||||||| | ||| Sbjct 117727 ACCTCG-CGCCTGACCTCCACGACTGGGACAACAAGCTGAACGACAACGAGCGCTACTTC 117785 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||||||| ||||||||||| |||||| ||| || ||||| ||||||||| | Sbjct 117786 ATCGAGCACGTGCTCGCCTTTTT-CGCCGCGTCCGACGGTATCGTCAACGAGAACCTCGT 117844 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || ||||| ||||| || | | ||||| ||| ||||| |||||||| Sbjct 117845 CGAGCGCTTCTGCGGTGAGGTGCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGAT 117904 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || || ||||||||||| |||||||||||| || || Sbjct 117905 CATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACCTACATCCGTGA 117964 Query 1456068 C----CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGA 1456123 | || | || | |||| || | |||||||| || | || | | | || Sbjct 117965 CAATGCCCGCCG----CCAGTACCTGTTCCAGGCCATCGAGACCATTCCCTGCATCAAGA 118020 Query 1456124 AAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCG 1456183 | |||||||||||||| | |||||| | || | ||| | || | |||||| Sbjct 118021 AGAAGGCCGACTGGGCTCTCCGCTGGATCTCGGACCAGCG-TTCGTC-GTTCGGCGAGCG 118078 Query 1456184 GCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCT 1456241 || ||| || || | ||||||||||||||| ||||| ||| || |||| |||||| Sbjct 118079 CCTTATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTT-TGCGTCCATCT 118137 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | |||||||||||||| || |||||||||||||| Sbjct 118138 TCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 118171 Score = 192 bits (212), Expect = 8e-43 Identities = 238/319 (75%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519 ||||||||||| ||||||| |||| || | | ||| ||||| | ||| Sbjct 118218 GACTTTGCCTGCCTGCTCTTCACGCACCTTCGCCGCCGCCCGCACCCCGACACGATCAAC 118277 Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579 |||||||| ||||| ||| |||| ||| | ||||| ||| |||| | || || || Sbjct 118278 AAGATCATCAAGGAGGCGGTCAAGATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTC 118337 Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639 ||||||| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| Sbjct 118338 TCGCTCATTGGCATGAACGCCAA-GCTCATGTGCCAGTACATTGAGTTT-GTCGCCGACC 118395 Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGA---CGGCCAACCCGTTCCCA 1456696 |||| |||| || |||||| || | ||| || ||| |||||||||| ||| Sbjct 118396 GCCTCCTCGTCGCCCTCGGCAACG-ACAAGGTCT---GGAACTCGGCCAACCCCTTCGAC 118451 Query 1456697 TGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTG-GCGAG 1456755 | |||||| ||||||||||| |||||||| |||||||||||||| |||||| || Sbjct 118452 TTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGAGTCGCGCGTGTCCGCC 118511 Query 1456756 TACGCCAAGGCCGGCGTCA 1456774 ||| |||| | ||||||| Sbjct 118512 TACTCCAAATCTGGCGTCA 118530 >seq3 Length=2330021 Score = 132 bits (146), Expect = 7e-25 Identities = 339/514 (66%), Gaps = 19/514 (4%) Strand=Plus/Plus Query 259671 TTGTCGCCGAGCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCT 259730 ||||| || || ||||||||| || ||||| || ||| | | | ||| ||||||| || Sbjct 781054 TTGTCTCCAAGAACAAGGAGGCTCTTGACGCCGCGATCATCTATGACCGTGACTTTGCCT 781113 Query 259731 ACTCGTACTTTGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTG 259790 || ||||| ||| | |||| | || || ||||| | | || | Sbjct 781114 ACAACTACTTCGGTTTCAAGACCCTCGAGCGCTCTTACCTCCTCCGCATCGACGGAAAGA 781173 Query 259791 TCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCG 259850 | | |||||| |||||| | |||||||||||||| || |||| ||| | Sbjct 781174 TTGCCGAGCGTCCCCAGCACATGCTCATGCGTGTTTCCGTTGG----TAT--------CC 781221 Query 259851 ACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGT 259910 ||| || || | ||| | || ||| |||||| | |||| ||| | | Sbjct 781222 ACGGTGA---TGACATTGAGAAGGTCATCGAGACCTACAACCTCATGAGCGAGCGCTACT 781278 Query 259911 TCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGT 259970 ||||| || |||| |||||||| || | ||||| || | | | |||| ||||| | Sbjct 781279 TCACCCACGCCTCGCCGACGCTCTTCAACTCGGGCACCCCCCACGCCCAGATGTCGTCCT 781338 Query 259971 GCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGT 260030 |||| || | | |||||||| || || || || || ||||| ||||| |||||| | Sbjct 781339 GCTTCCTCGTCGCCATGAAGGAGGACTCCATTGACGGTATCTACGACACTCTCAAGACCT 781398 Query 260031 GCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGCGC 260088 | || | ||||| ||| | ||||| || || ||| | || || ||||| | || || Sbjct 781399 GTGCTCAGATCTCGAAGACTGCCGGTGGTATTGGTCT--CCACATCCACAACATTCGTGC 781456 Query 260089 CGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCG 260148 | |||| | ||| | || || ||||||||| | || ||||| | || ||||||||||| Sbjct 781457 CAAGGGCTCGTACATTGCCGGAACCAACGGCTACTCTAACGGTATCGTTCCCATGCTTCG 781516 Query 260149 CGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | | ||| || || || ||||| |||||| Sbjct 781517 TGCCTACGACGCTACCGCTCGTTACGTTGACCAG 781550 Score = 107 bits (118), Expect = 3e-17 Identities = 310/482 (64%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| ||||||| ||| ||||| ||| |||||| || || |||||||||||| || Sbjct 781551 GGTGGCAACAAGCGCCCGGGTGCCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATC 781610 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||| ||||||||| |||||||| || |||| |||| || || || | Sbjct 781611 TTCGACTTCCTGGACCTCCGTAAGAACCATGGAAAGGA----GGAGGTTCGTGCCCGTG- 781665 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 | ||||| |||| ||| |||| | |||||| || ||| || | | | | | | | Sbjct 781666 -ACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCTGACGGT 781724 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | |||||| | ||| || ||||| ||| | | || || Sbjct 781725 GACTGGACCCTCATGTGCCCGGCTGAGTGCCCTGGCCTCGCCGACGTCCACTCCGAGGAG 781784 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 || || || || ||| || |||| | | || Sbjct 781785 TTCGAGAAGCTGTACGAGAGCTACGAGCGTGCCGGTAAGGGTCGCAAGACCATTAAGGCC 781844 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 | | || |||||| ||||| | | ||| || | ||||||||| |||| |||| Sbjct 781845 ---CAAAAGCTCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGGTGGTCCCTTCATG 781901 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG 262204 ||||||||||||| | ||||| | |||||||||| |||| ||||||| | | Sbjct 781902 CTCTACAAGGACGCTGCCAACCGCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCG 781961 Query 262205 GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAAC 262264 | ||||| ||||| |||||| || ||| ||||| || ||||| ||||||||| Sbjct 781962 TCGAACCTCTGCACTGAGATCATCGAGTACTCGTCCCCTGACGAGGTTGCCGTGTGCAAC 782021 Query 262265 CT 262266 || Sbjct 782022 CT 782023 Score = 89.7 bits (98), Expect = 7e-12 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGGCGG 263236 ||||||| | | |||||| || |||||| | | | || | || || | || | Sbjct 782716 TCAAGGCCATTTACAAGACTGTCTGGGAGATCTCGCAGAAGGCGGTTATCGACCTCGCTG 782775 Query 263237 CCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGA 263296 ||||||| | | | |||||||| |||||||||||| | ||||||| |||| Sbjct 782776 CCGACCGTGGAGCGTTCATCGACCAGTCGCAGTCGCTCAACATCCACCTCGCGAACCCCT 782835 Query 263297 CGGCCGAG-AGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGC 263355 || | ||| |||| ||||||||| ||| | ||| || || ||||||||||| Sbjct 782836 CGTTCTCCCAGC-TCACCTCGATGCACTTCTACGGCTGGAAGCGTGGACTCAAGACTGGT 782894 Query 263356 ATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408 ||||| || |||||||| || || ||||||||||| || ||||| |||| Sbjct 782895 GCCTACTACCTCCGCACCCGTCCTGCCGCCAACGCCATCCAGTTCACTATCGA 782947 >seq5 Length=2256092 Score = 129 bits (142), Expect = 8e-24 Identities = 179/249 (72%), Gaps = 14/249 (6%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 |||||||| || | ||||||||||| ||||||||||| |||||| || | | | Sbjct 300638 TCGTACTCTTCGTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----A 300692 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || || |||||| ||||| | || | |||||||| || |||||| |||| || ||| Sbjct 300693 TC-TCGAACAAGGCCATGGCCATTCTCAACTCGTTCGTTGCCGACATCTTCGAGCGTATC 300751 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCG 725071 | ||||||||| || || |||| | ||| | ||| || ||| |||| Sbjct 300752 GCTACCGAGGCCT----CCAAGCTCGCTTCGTACAACCACCGCTCGACCATCTCGTCGCG 300807 Query 725072 CGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTC 725131 ||||||||||||||||| ||||| ||| | | ||| || || ||| ||||||| |||| Sbjct 300808 TGAGATCCAGACCGCCGTCCGCCTCATCCTCCCCGGAGAGCTCTCCAAGCACGCCATCTC 300867 Query 725132 CGAGGGCAC 725140 |||||||| Sbjct 300868 TGAGGGCAC 300876 Score = 104 bits (114), Expect = 3e-16 Identities = 187/269 (70%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACG-ACGTGTTGCAG 332932 ||||||||||||| || || ||| | | ||| |||| | ||| | | |||| || Sbjct 293790 AGCGCAGGATGGCGCAGCGCGACTGGATCGGCTCAATGATC-TTGTTGCTCATGTTACAC 293848 Query 332933 GCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGG 332992 || || || || |||||||| || | | | ||||| || ||||| || || || Sbjct 293849 GCGAGCGCGAAGCGCGTCGTGTTCGAGTAGATCTCCATCGTGCGGCGGAGCGCTTGCTGC 293908 Query 332993 GCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGC 333052 || | | ||| | || ||| ||||||||||||||||| |||||||| || || |||| Sbjct 293909 GCGCCAGCCGTCATGCTGTCCGCCTCGTCGAGGATGATCATCTTGTGCCGGCCTGGCGG- 293967 Query 333053 AGATCAACCCTTTTCG--AGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGC 333110 || | |||| || ||| | ||||| | || ||||| ||||| | ||| | Sbjct 293968 -GAGCGTGACTTTGCGCTGAGCGAAGGACTTGATCTTGTTTCGCACCACGTCAATGCCAC 294026 Query 333111 GCTCGTCCGACGCGTTGAGTTCGAGCACG 333139 ||||||| || ||||| || ||||||||| Sbjct 294027 GCTCGTCAGAGGCGTTCAGCTCGAGCACG 294055 >seq2 Length=2838010 Score = 104 bits (114), Expect = 3e-16 Identities = 156/217 (72%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 1600557 CCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGT 1600616 || |||||||| ||| ||| ||||||||||||| ||||| |||||||||| ||| Sbjct 2252963 CCGCCTTGCCCGAGAGCAGCTCGATCATCTTGCCCACCGTCATACGCGACGGGAAACCGT 2252904 Query 1600617 GCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTCGG 1600676 ||||||| || | ||||||||| | ||| | | | || | |||||||||| | Sbjct 2252903 GCGGGTTCATGATAATGTCGGGGCAGATACC-CTGGTCGTTGA--ACGGCATGTCCT-GC 2252848 Query 1600677 TGGAGCGCACGCTGCCCAC-GGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTCGCCC 1600735 ||| || || | |||| |||||| || |||||||||||||| | |||||||| Sbjct 2252847 TGGGGCACAATGAGGCCACACACGCCCTTCTGTCCGTGGCGCGACGAGAACTTGTCGCCG 2252788 Query 1600736 ACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGA 1600772 | ||| || ||||| | ||||||| ||||||| Sbjct 2252787 AGCTCTGGGCGGCGCGTCTGGCGCGTGAGAATCTTGA 2252751 >seq14 Length=350055 Score = 89.7 bits (98), Expect = 7e-12 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 1456608 ATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGA 1456667 |||||||||||||| || ||| || || |||||||| ||| |||||||| | || ||| Sbjct 102766 ATGTGCCAGTACATGGAGTTT-GTGGCTGACCGCCTTGTCGTCGCGCTCGGATACG-AGA 102709 Query 1456668 AGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGA 1456727 || ||||| | | ||||||||| ||||||||| | ||||| || | ||||| Sbjct 102708 AGATCTACCACTCAACGAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAAGGCAAAG 102649 Query 1456728 CCAACTTTTTCGA 1456740 | ||||||||||| Sbjct 102648 CGAACTTTTTCGA 102636 >seq15 Length=347401 Score = 86.0 bits (94), Expect = 9e-11 Identities = 215/324 (66%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 2133537 GCCCTCTTTGACGAGGCGTCGGACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCC 2133596 ||| |||| | ||||| || |||||||| | || || || |||||| | ||||| Sbjct 255175 GCCGTCTTCGCCGAGGACCACGAGGAGATGGTCATCGTCCGTGACATTGACGTCTTCTCG 255116 Query 2133597 ATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCC-GC 2133655 | |||||||||||||| | || || | ||||||| | | |||||| | ||| | Sbjct 255115 CTCTGCGAGCACCACCTCGTCCCGTTCACCGGCAAGATCTCGATCGGCTACATCCCCAAC 255056 Query 2133656 GGGCAAGATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTT 2133715 || | || |||| || |||||| || | || |||| ||| | || || |||| | Sbjct 255055 AAGCTCG-TCCTCGGACTCAGCAAGCTCGCTCGTATCGCCGAAACCTTCTCGCGCCGCCT 254997 Query 2133716 CCAAGTACAGGAGGCACTCACGCGCCAGATCGCCGAGAGCGTGAGCCAGGTTACGGGCGC 2133775 ||||| ||||| ||||| ||| ||||| | | | | ||| | || | Sbjct 254996 TCAAGTTCAGGAACGCCTCACAAAGCAGGTCGCCCTGGCCATCATGGAGGCCATCCGCCC 254937 Query 2133776 GCGCGGCGTCGGCGTCGTCCTCGAGGGCCTGCACATGTGCGTGTGTATGCGCGGCGTGCG 2133835 ||| || |||| |||||| | |||| ||||||||| ||| |||||||| || | Sbjct 254936 GCGTGGTGTCGCCGTCGTGATGGAGGCTAGCCACATGTGCATGTCGATGCGCGGTGTCCA 254877 Query 2133836 CAAAACGGGCTCGAACACGGTCAC 2133859 || | ||| ||| ||| || || Sbjct 254876 GAAGCCCGGCGCGACCACAGTTAC 254853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807727733832