Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3 132 4e-26 seq1 82.4 7e-11 >seq3 Length=2330021 Score = 132 bits (146), Expect = 4e-26 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| || |||||||| |||||||| Sbjct 20123 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 20064 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| ||||| ||| | || Sbjct 20063 GATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 20005 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||| | ||||| || || || || | ||| |||| Sbjct 20004 TGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCA 19945 Query 35724 CAAATATCTGCATTC 35738 |||| |||||||||| Sbjct 19944 CAAAGATCTGCATTC 19930 Score = 125 bits (138), Expect = 6e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || |||| ||||||||||| || ||||| Sbjct 20351 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAA 20292 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||| || Sbjct 20291 AATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTCA-CGT 20233 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||||| ||||||||| |||||||| | || || | Sbjct 20232 TGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGA 20173 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 20172 CGAAGATCTGCAT 20160 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | || || | || ||||||||||| || ||||| Sbjct 20579 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAA 20520 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| || |||||||||| ||||| ||||| || Sbjct 20519 GATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCA-CGT 20461 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||||||| || || || | || || | Sbjct 20460 TGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGA 20401 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 20400 CGAAGATCTGCATTC 20386 >seq1 Length=4053335 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 1442472 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1442413 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||| | |||| || |||||||||| |||||| Sbjct 1442412 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1442365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793397142880