Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq20 140 4e-28 seq3 140 4e-28 seq1 84.2 3e-11 >seq20 Length=206136 Score = 140 bits (154), Expect = 4e-28 Identities = 243/343 (71%), Gaps = 8/343 (2%) Strand=Plus/Minus Query 122481 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 122540 |||||| || || | ||| |||||||||||| | |||| || | |||||| || || Sbjct 118403 GAGGAGGCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCAAT 118344 Query 122541 GAG-GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 ||| | || ||||| || || || |||| | | |||||||| |||||||| || | Sbjct 118343 GAGCGAGACG-GGGAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACCGCCTCCTTGA 118285 Query 122600 CGATGGCGTGGATAGTTTCGGTAGTG-GGTCTATTACGCAAAGT-CTTGAAGAGCTCCAC 122657 ||| || ||| || |||| ||| || | || || || | |||||||| Sbjct 118284 TGATCTTGTTGATCGTGTCGGG-GTGCGGGCGGCGGCG-AAGGTGCGTGAAGAGCAGGCA 118227 Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || |||||||||||| || || || || || || || |||||| ||||| Sbjct 118226 GGCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAGGTGAGACC 118167 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 ||||||||||| |||||||| | ||| | || | |||| || || || |||||||||| Sbjct 118166 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCA-AACGAGCCAGAGAAGAAGA 118108 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 | ||||| || || || || | |||||| ||| |||| || Sbjct 118107 TGCCCTCGACGGCAGCGAAAGCGATAAGGCGCTCGCCGAACGA 118065 >seq3 Length=2330021 Score = 140 bits (154), Expect = 4e-28 Identities = 354/536 (66%), Gaps = 13/536 (2%) Strand=Plus/Minus Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 111615 ||| || ||||||||||| ||||| | ||||| |||| | ||||| || | || Sbjct 781715 CTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACG 781656 Query 111616 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 111675 | |||| || | || ||||| || | || ||||| || | ||| || |||||||| Sbjct 781655 AACCTCCTCCTTTCCATGGTTCTTACGGAGGTCCAGGAAGTCGAAGATGTCGGCGTGCCA 781596 Query 111676 TGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATA 111729 ||||| || |||| |||| | ||| | ||| ||| | || | || || Sbjct 781595 GGGCTCGAGGTAGATGGCGAAGGCACCCG---GGCGCTTGTTGCCACCCTGGTCAACGTA 781539 Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789 || || || |||| | | |||||||| |||| ||||| | || | || || || Sbjct 781538 ACGAGCGGTAGCGTCGTAGGCACGAAGCATGGGAACGATACCGTTAGAGTAGCCGTTGGT 781479 Query 111790 CCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCA 111847 || ||| ||||| | |||| | | | |||||||| | |||||||| || Sbjct 781478 TCCGGCAATGTACGAGCCCT--TGGCACGAATGTTGTGGATGTGGAGACCAATACCACCG 781421 Query 111848 GCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCC 111907 || ||| ||||| || ||||| | | ||||| | |||||||||| || |||||| Sbjct 781420 GCAGTCTTCGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATACCGTCAATGGAGTCC 781361 Query 111908 TCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAG 111967 ||||| |||||| |||||||| |||||||| | || || || | |||||| Sbjct 781360 TCCTTCATGGCGACGAGGAAGCAGGACGACATCTGGGCGTGGGGGGTGCCCGAGTTGAAG 781301 Query 111968 AGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACA 112027 || || || | ||||| |||| | | | ||| || ||| ||||| | ||| Sbjct 781300 AGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGCTCATGAGGTTGTAGGTCTCGATGACC 781241 Query 112028 GAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||||||| || |||||||| || | | || ||||||| ||||| ||| || Sbjct 781240 TTCTCAATGTCATCACCGTGGATACCAACGGAAACACGCATGAGCATGTGCTGGGG 781185 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 11678 |||||| | || |||||||| || ||||||| || || || || ||| || || Sbjct 337607 CTTGCCGATGGCGTCAATCTCGTCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCCG- 337549 Query 11679 TTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG 11738 | | ||||||||||| || | || ||| ||||| ||||||||||||||||| | | Sbjct 337548 TCGCGAAGAGATCGCGCACACGCGAGGGACCGACACCGACAAACATCTCCACAAACTCGG 337489 Query 11739 CGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGG 11797 | || ||| | || ||| || || || | || ||||| | || ||||||||| Sbjct 337488 ATCCGGA-CACAGAGAGGAAGGGAACCTTGGCCTCGCCCGCCGTCGCCTTGGCGAGGAGC 337430 Query 11798 GTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||||| ||||| || || ||| | ||| | ||| || ||||| |||||||| || Sbjct 337429 GTCTTACCCGTTCCCGGGGGACCGGAGAGGATGGCACCACGGGGAATCTTGGCTCC 337374 >seq1 Length=4053335 Score = 84.2 bits (92), Expect = 3e-11 Identities = 190/281 (68%), Gaps = 10/281 (4%) Strand=Plus/Minus Query 11623 GCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTC 11682 ||||| || || | ||| |||||||| ||||| || || |||| || | Sbjct 271078 GCCCATGGCGTCGAGCTCGTCAATGAAAACAATGGCGGGAGCCTTGGCGCGCGCAGCCTT 271019 Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAG---TTTGC 11739 ||||| ||||| || | |||||||| ||||| ||||||||||| | ||| | | Sbjct 271018 GAAGAGCTCGCGCACGCGCTTGGCACCGACACCGACAAACATCTCGTCGAAGGCAGATCC 270959 Query 11740 GGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799 || || | | || ||| || || | | || || |||||||| || |||||||| || Sbjct 270958 GGAAGCGAA---GAAGAAGGGCACCTCCGCCTCGCCGGCGATGGCGCGCGCGAGGAGCGT 270902 Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTT 11857 ||| || ||||| ||| || | ||| ||| |||| ||||| ||| | || ||| Sbjct 270901 CTTACCAGTACCCGGCGGGCCGGTGAGGAGGACGCCCTTGGGGAGCTTTCCGCCGAGCTT 270842 Query 11858 CCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTC 11898 | || |||| ||||||| ||| || || |||||||| Sbjct 270841 GGAGAACTTCTC-GGGGTTGC-GGAGGAACTCGACAATCTC 270803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031717385600