Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 212 8e-50 seq20 143 3e-29 seq14 132 6e-26 >seq3 Length=2330021 Score = 212 bits (234), Expect = 8e-50 Identities = 684/1051 (65%), Gaps = 37/1051 (4%) Strand=Plus/Minus Query 118527 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG 118586 || |||||||| ||||||||||| || | ||||| || | ||| || || || || || Sbjct 782218 TCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 782160 Query 118587 GTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 118643 ||| ||||| || | || | | ||| ||| | || || |||||||||| Sbjct 782159 --CTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACAACC 782102 Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 118703 || ||||| || || ||||| | | | || | | ||||| ||||| | Sbjct 782101 TTGGTGATCTCGTGGAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCG 782042 Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || ||||| || || || || ||||| | ||| || | |||||| || Sbjct 782041 GGGAGAGCGATCGAGGCAAGGTTGCACACGGCAACCTCGTCAGGGGACGAGTACTCGATG 781982 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | ||| || ||| |||||||| | || || || || ||||| | Sbjct 781981 ATCTCAGTGCAGAGGTTCGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 781922 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||| |||||| | || || ||||| || || | || || || Sbjct 781921 TTGGCAGCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATG 781862 Query 118884 GCCTTCCAGACATCGGCAGCTGGCAC--AGTGGCGTTGGCTCGCCCCTCTTC------CT 118935 || ||||| || ||| | | ||| ||| || |||| | || Sbjct 781861 GCGAACCAGA-----GCTTTTGGGCCTTAATGGTCTTG---CGACCCTTACCGGCACGCT 781810 Query 118936 CGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCT 118995 |||| | ||| || || ||||| || | | || | ||| || || || Sbjct 781809 CGTAGCTCTCGTACAGCTTCTCGAACTCCTCGGAGTGGACGTCGGCGAGGCCAGGGCACT 781750 Query 118996 TATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTG 119055 | | ||||| | ||| | ||| | ||| | ||| || ||||||||||||||||| | Sbjct 781749 CAGCCGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGG 781690 Query 119056 GGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 119115 ||||||||| || ||||||| || || ||| | || || | || || || || Sbjct 781689 AGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCATGGTTCTTAC 781630 Query 119116 GCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC 119174 | | |||| ||||| | ||| || |||||||| || || ||||| | |||| | || Sbjct 781629 GGAGGTCCAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCAC 781570 Query 119175 CC-----CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 || ||| | | ||| |||||| || || | || || |||| | |||||| Sbjct 781569 CCGGGCGCTT--GTTG-CCACCCTGGTCAACGTAACGAGCGGTAGCGTCGTAGGCACGAA 781513 Query 119230 GCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGC 119287 |||| |||| |||||| | || | ||| || || || || |||||| | ||||| Sbjct 781512 GCATGGGAACGATACCGTTAGAGTAGCCGTTGGTTCCGGCAATGTACGAGCC--CTTGGC 781455 Query 119288 TCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 119347 | | | ||||||||| | ||||||||| || || ||| ||||| || || || Sbjct 781454 ACGAATGTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCACAGGT 781395 Query 119348 CGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCT 119407 | ||||| || ||||||| || || || ||||| |||| | |||| |||||||||| Sbjct 781394 CTTGAGAGTGTCGTAGATACCGTCAATGGAGTCCTCCTTCATGGCGACGAGGAAGCAGGA 781335 Query 119408 CGACATTTGAGGCCT-GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACA 119466 |||||| || ||| | ||| || || | ||||||||| || || | |||||| |||| Sbjct 781334 CGACATCTG-GGCGTGGGGGGTGCCCGAGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGT 781276 Query 119467 TACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATAC 119526 | | | ||| || ||||||||| | ||| |||||| || ||||| |||| Sbjct 781275 AGCGCTCGCTCATGAGGTTGTAGGTCTCGATGACCTTCTCAATGTCATCACCGTGGATAC 781216 Query 119527 CGATCGAGACCCGCATAAACATGTATTGGGG 119557 | | || || ||||| | ||||| ||||| Sbjct 781215 CAACGGAAACACGCATGAGCATGTGCTGGGG 781185 Score = 109 bits (120), Expect = 7e-19 Identities = 169/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATT-TTCACGGGCAA 14291 ||| |||| ||||||||| || |||||||| | ||| || || || ||| || | Sbjct 337607 CTTGCCGATGGCGTCAATCTCGTCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCCGT 337548 Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 | | |||| ||| ||||| | | || ||||||||| ||||||||||||||||| | || Sbjct 337547 CG-CGAAGAGATCGCGCACACGCGAGGGACCGACACCGACAAACATCTCCACAAACTCGG 337489 Query 14352 CGGCGGA-ACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGG 14410 |||| ||| || |||||| || || | || ||||| | || ||||||||| Sbjct 337488 ATCCGGACACA-GAGAGGAAGGGAACCTTGGCCTCGCCCGCCGTCGCCTTGGCGAGGAGC 337430 Query 14411 GTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 ||||| ||||| || || || | ||| | ||||||||| || ||| |||| || Sbjct 337429 GTCTTACCCGTTCCCGGGGGACCGGAGAGGATGGCACCACGGGGAATCTTGGCTCC 337374 >seq20 Length=206136 Score = 143 bits (158), Expect = 3e-29 Identities = 234/332 (70%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 |||||| || || | ||| |||||||||||| |||| || || |||||| || || Sbjct 118403 GAGGAGGCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCAAT 118344 Query 129898 GAG-GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCA 129956 ||| | || ||||| || || || |||| ||| |||||| | || || ||| | Sbjct 118343 GAGCGAGACG-GGGAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACCGCCTCCTTGA 118285 Query 129957 CGATGGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACG 130015 ||| || || || || | | || | ||| || || | ||||||| | Sbjct 118284 TGATCTTGTTGATCGTGTCGGGGTGCGGGCGGCGGCG-AAGGTGCGTGAAGAGCAGGCAG 118226 Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||||||||||||||| || |||||||| || ||||||||| ||||| Sbjct 118225 GCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAGGTGAGACCG 118166 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| |||||||| | |||||| || | ||| ||||||||||||||||| Sbjct 118165 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCAAACGAGCCAGAGAAGAAGATG 118106 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTC 130167 ||||| || ||||| || | || ||||| Sbjct 118105 CCCTCGACGGCAGCGAAAGCGATAAGGCGCTC 118074 >seq14 Length=350055 Score = 132 bits (146), Expect = 6e-26 Identities = 252/365 (69%), Gaps = 11/365 (3%) Strand=Plus/Plus Query 129881 TCGGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATG 129940 |||| ||| |||||||| ||| ||||||||| |||||| | ||| ||||||||||| Sbjct 102807 TCGGCGTTGATACCGATCAGGGCACATGGGAGAGCGTCCGTCAAAAACTCCTTCTCAATG 102866 Query 129941 TCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGTGCCAGGTCTATTGC--GCAAAG 129998 |||| | || |||||| ||||| ||| ||| | || || | | | Sbjct 102867 TCCAGCGACTCTTTCACGATCTTGTGAACTTCCTCT-TGCGAACACTTGTGTTTGAGATG 102925 Query 129999 TCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCAT 130058 || | | || ||| || || ||| || |||||||| || |||||| || | Sbjct 102926 GCTATACAACAGACA-GGCGAAGTCGGTGTGTAGGCCCTCGTCTCGACTGATGAGCTCGT 102984 Query 130059 TCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATG 130118 ||||||| || ||| ||||||||| ||||||||||||||||| |||||| ||| | Sbjct 102985 TCGAGAACGTCAAACCGCCCATGAGACCGCGCTTCTTCAACCAGAAGATCGCAGCAAACG 103044 Query 130119 AGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACG-CTCAGCAAAGGAG 130177 | |||||||||||||| || || || || ||||| || | ||||| || | ||| Sbjct 103045 ATCCAGAGAAGAAGATACCTTCAACGCAAGCGAAGGCGATCAGACGTATCCGGAAA---- 103100 Query 130178 CGGGACTTTGT-ATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 || || | || | ||||||||||||| | |||||||||| ||||| |||| Sbjct 103101 -GGTACATCGTCGGTGATGTACTTCATCGCCCAGTCGGCCTTTTTCTGAATACAAGGGAT 103159 Query 130237 GGTCT 130241 | ||| Sbjct 103160 GTTCT 103164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434921704160