Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 170 2e-37 seq20 125 8e-24 seq14 98.7 1e-15 seq1 86.0 7e-12 >seq3 Length=2330021 Score = 170 bits (188), Expect = 2e-37 Identities = 672/1051 (64%), Gaps = 37/1051 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || | ||||| || || || |||||||| ||| Sbjct 781185 CCCCAGCACATGCTCATGCGTGTTTCCGTTGGTATCCACGGTGATGACATTGAGAAGGTC 781244 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || ||| | | | |||| ||||| | || || |||||| Sbjct 781245 ATCGAGACCTACAACCTCATGAGCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 781304 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || | || || || |||| ||||| |||||||| |||||| ||||||||| Sbjct 781305 AACTCGGGCACCCCCCACGCCCAGATGTCGTCCTGCTTCCTCGTCGCCATGAAGGAGGAC 781364 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || || |||||||||| | ||||| | | ||||| || ||||| ||| || || Sbjct 781365 TCCATTGACGGTATCTACGACACTCTCAAGACCTGTGCTCAGATCTCGAAGACTGCCGGT 781424 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACAA 104519 |||||||| | |||||||| | | | |||| | ||||| ||| || || | Sbjct 781425 GGTATTGGTCTCCACATCCACAACATTCGTGCCA--AGGGCTCGTACATTGCCGGAACCA 781482 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || | || | ||||| |||| |||||||| | | |||| || || || || | Sbjct 781483 ACGGCTACTCTAACGGTATCGTTCCCATGCTTCGTGCCTACGACGCTACCGCTCGTTACG 781542 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| ||| | ||| | |||| |||| || ||||| |||| Sbjct 781543 TTGACCAGGGTGGCAACAAGCGCC---CGGGTGCCTTCGCCATCTACCTCGAGCCCTGGC 781599 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || ||| | || ||||| || | ||| ||||| || | ||||||| || Sbjct 781600 ACGCCGACATCTTCGACTTCCTGGACCTCCGTAAGAACCATGGAAAGGAGGAGGTTCGTG 781659 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG---G 104750 ||| || ||||||| ||| |||||||| | || |||||||||||| | || ||| | Sbjct 781660 CCCGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCTG 781719 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | ||| | ||| | ||| | || || | || ||||| ||| |||| | | Sbjct 781720 ACGGTG---ACTGGACCCTCATGTGCCCGGCTGAGTGCCCTGGCCTCGCCGACGTCCACT 781776 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG------GAAGAAGGTCGGGCGACTG 104864 |||||||| || || ||| | |||||| | | ||||| ||| Sbjct 781777 CCGAGGAGTTCGAGAAGCTGTACGAGAGCTACGAGCGTGCCGGTAAGGGTCGCAAGACCA 781836 Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 | || ||| || | ||| || || || || |||| |||||||| ||| Sbjct 781837 TTAAGG-CCCAAAAGC-----TCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGGTG 781890 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | |||||| ||||| ||||| |||| ||| || || || | | || Sbjct 781891 GTCCCTTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCCAACCAGCAGCACCTCGGCA 781950 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 |||||| || || ||||| || || ||| | || | | | || ||| | Sbjct 781951 CCATCAAGTCGTCGAACCTCTGCACTGAGATCATCGAGTACTCGTCCCCTGACGAGGTTG 782010 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT 105104 | ||||| ||||| || || |||||||||||| | || | ||||| ||||| | Sbjct 782011 CCGTGTGCAACCTTGCCTCGATCGCTCTCCCCGCCTTCGTCAACTTCGAGACCAAGACCT 782070 Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164 || | | || |||||||| | || || ||||||| ||||| || || | Sbjct 782071 ACGACTTCAAGAAGCTCCACGAGATCACCAAGGTTGTCACCCGCAACCTTGACCAGGTCA 782130 Query 105165 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 | | | || | |||||||| ||| || || || || || ||| | ||||| | Sbjct 782131 TCACTCGCAACTACTACCCCGTCCCCGAG---GCGCGCAACTCGAACATGCGCCACCGCC 782187 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGA 105252 | | ||||||||||| ||||||||||| || Sbjct 782188 CCGTCGGTCTCGGTGTCCAGGGTCTCGCCGA 782218 Score = 118 bits (130), Expect = 1e-21 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 9752 ||| || | ||| |||||||| || ||||||| |||||| || || ||| | || Sbjct 337607 CTTGCCGATGGCGTCAATCTCGTCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCCGT 337548 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | | |||||||| || |||||| || || ||||| ||||||||||||||||| | | Sbjct 337547 CG-CGAAGAGATCGCGCACACGCGAGGGACCGACACCGACAAACATCTCCACAAACTCGG 337489 Query 9813 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 |||| || | || |||||| || || | || ||||| | || |||||| || Sbjct 337488 ATCCGGA-CACAGAGAGGAAGGGAACCTTGGCCTCGCCCGCCGTCGCCTTGGCGAGGAGC 337430 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 ||||||||||| || || ||| | ||||| |||||| || ||||||||||| || Sbjct 337429 GTCTTACCCGTTCCCGGGGGACCGGAGAGGATGGCACCACGGGGAATCTTGGCTCC 337374 >seq20 Length=206136 Score = 125 bits (138), Expect = 8e-24 Identities = 121/153 (79%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| || |||| || || || ||||| |||||||||||||| || || |||| | Sbjct 118074 GAGCGCCTTATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTT-TGCGTC 118132 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | |||||||||||||| ||||||||||| |||||| |||||| |||||||| || Sbjct 118133 CATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCAT 118192 Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| || |||||||| |||||| || ||||| Sbjct 118193 CTCGCGCGACGAGGGTCTCCACACCGACTTTGC 118225 >seq14 Length=350055 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/210 (72%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGC-GTTC 94796 || |||||||| || || || || ||||| ||||||| | || | || || | Sbjct 103156 CCTTGTATTCAGAAAAAGGCCGACTGGGCGATGAAGTACAT-----CACCGACGATGTAC 103102 Query 94797 CTTTGCTGAG-CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| | || || || |||| || || || ||||| ||||||||||||||||| || | Sbjct 103101 CTTTCCGGATACGTCTGATCGCCTTCGCTTGCGTTGAAGGTATCTTCTTCTCTGGATCGT 103042 Query 94856 TCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 | ||| || || | ||| | |||||||| ||||||||| ||| | ||||| ||| Sbjct 103041 T-TGCTGCGATCTTCTGGTTGAAGAAGCGCGGTCTCATGGGCGGTTTGACGTTCTCGAAC 102983 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||| ||| ||| |||||||| || ||| Sbjct 102982 GAGCTCATCAGTCGAGACGAGGGCCTACAC 102953 >seq1 Length=4053335 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 9698 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 9757 |||| ||| || | ||| |||||||| || ||| || || |||| || | | Sbjct 271077 CCCATGGCGTCGAGCTCGTCAATGAAAACAATGGCGGGAGCCTTGGCGCGCGCAGCCTTG 271018 Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817 ||||| || || || |||||||| || ||||| ||||||||||| | ||| | || Sbjct 271017 AAGAGCTCGCGCACGCGCTTGGCACCGACACCGACAAACATCTCGTCGAAGGCAGATCCG 270958 Query 9818 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 ||| || |||||| || | | || || || ||||| || ||||| || |||||| Sbjct 270957 GAAGCGAAGAAGAAGGGCACCTCCGCCTCGCCGGCGATGGCGCGCGCGAGGAGCGTCTTA 270898 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGG 9904 || ||||| ||| || | ||||||| Sbjct 270897 CCAGTACCCGGCGGGCCGGTGAGGAGG 270871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260537532640