Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5 223 1e-52 seq3 123 8e-23 seq1 89.7 2e-12 >seq5 Length=2256092 Score = 223 bits (246), Expect = 1e-52 Identities = 624/952 (66%), Gaps = 13/952 (1%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || ||||| | || || || ||||| |||||||| || ||||| || || || Sbjct 769807 GCTATTGGTATCGACCTCGGCACCACGTATTCGTGTGTTGCAGTGTGGCAGAACGACCGC 769748 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| || || || || ||| | || || || || ||||| || || ||| Sbjct 769747 GTCGAAATCATTGCGAACGACCAGGGAAACCGCACCACCCCTTCTTACGTCGCTTTCACC 769688 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || |||||||| | || |||||| | || || || || | ||| || || | || Sbjct 769687 GACTCTGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTTGCGATGAACCCTTACAAC 769628 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACA 349434 || ||||| || || ||||| || || || | | || |||||| | || || Sbjct 769627 ACCGTTTTCGACGCCAAGCGTCTCATCGGCCGCAAGTTCTCTGACCCCGAGGTC----CA 769572 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || || | || || | || || | || | | | ||| || || || || Sbjct 769571 GTCCGACATGAAGCACTGGCCCTTCAAGGTCAT-CGACAAG--GGCACCAAGCCCTACAT 769515 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || || ||||| || || || || | ||||| || || || || ||||| Sbjct 769514 CCAGGTCGAGTACCGCGGTGAGCAGAAGCAGTTCTCTCCCGAGGAGATCTCGTCCATGGT 769455 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | | || |||||||| | ||| || || || | || | || || | | || || Sbjct 769454 CCTCATCAAGATGAAGGAGACTGCCGAGGCCTACCTTGGCGGCACTGTTTCCAAGGCCGT 769395 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| || ||||| || || || | |||||| || || || || || || | Sbjct 769394 CATCACTGTCCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGACGCCGGTAC 769335 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| | || | | || || | || || || || ||||| ||||| || ||||| || Sbjct 769334 CATCTCTGGTCTCGAGGTCCTCCGTATCATCAACGAGCCCACCGCTGCCGCCATTGCCTA 769275 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | || ||| || || || |||| || || || | |||||||| Sbjct 769274 CGGTCTCGACAAGAAGACTGAGGGCGAGAAGAACGTTCTCATCTTCGACCTTGGTGGTGG 769215 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || || || || |||| ||||| || || || || || || || || Sbjct 769214 TACCTTCGATGTCTCCCTTCTTACCATTGAGGAGGGCATCTTCGAGGTCAAGGCCACCGC 769155 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||| || || |||||||| || || ||||| || |||||||| || ||||| | Sbjct 769154 CGGTGACACCCACCTTGGTGGTGAGGACTTTGACAACCGTCTCGTCAACCACTTTGTCCA 769095 Query 349915 AGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| || | || | | || | | || | ||||| | Sbjct 769094 GGAGTTCAAGCG-CAAGAACAAGAAGGACCTGACTGGCAACGCCCGTGCCCTCCGTCGTC 769036 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 | | || ||||| || ||||| ||||| || | || ||| || |||| ||||| || | Sbjct 769035 TCCGCACCGCGTGCGAGCGTGCCAAGCGCACCCTCTCGTCTGCTGCCCAGACCTCGATCG 768976 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | || || || || || |||| || |||| | || || || ||||| || || | Sbjct 768975 AGATCGACTCGCTCTTCGACGGCATCGACTTCTACACCTCGATCACCCGTGCCCGTTTCG 768916 Query 350094 AAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 | || | || ||| || || | | || ||||| || || || || || Sbjct 768915 AGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAGAAGGT 768864 >seq3 Length=2330021 Score = 123 bits (136), Expect = 8e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || ||||| || ||||| || ||||| || || || || | || || ||||| Sbjct 20599 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCC 20540 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || |||||||||||||| || || ||||| ||||| ||||| || || || ||| Sbjct 20539 TCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 20480 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || | || || || || || | || || | || || || || || | ||| Sbjct 20479 TGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTC 20420 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| || || || || || ||||||||| Sbjct 20419 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 >seq1 Length=4053335 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 1442510 ATACCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 1442451 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| ||||| ||||| || || Sbjct 1442450 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGG 1442391 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || || ||||| || || | || || || || || | || || | || Sbjct 1442390 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCG 1442331 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || |||| ||||| ||||| || Sbjct 1442330 ACCTCGAGAGTAATGGTCTTACCGGTGAG 1442302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253701088908