Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 277 2e-69 seq1 129 6e-25 >seq3 Length=2330021 Score = 277 bits (306), Expect = 2e-69 Identities = 525/771 (68%), Gaps = 14/771 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || || | |||||||||||||| ||| | ||| ||||| ||| Sbjct 781198 TCATGCGTGTTTCCGTTGGTATCCACGGTGATGACATTGAGAAGGTCATCGAGACCTACA 781257 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | |||||| | ||||| || |||||| |||| || || |||||| | || || Sbjct 781258 ACCTCATGAGCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTCAACTCGGGCACCC 781317 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||| | ||||||||| ||||||||| || || |||||||| ||||| || ||||| | Sbjct 781318 CCCACGCCCAGATGTCGTCCTGCTTCCTCGTCGCCATGAAGGAGGACTCCATTGACGGTA 781377 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| || |||||| ||||| || ||||| ||| | |||||||| ||| ||| Sbjct 781378 TCTACGACACTCTCAAGACCTGTGCTCAGATCTCGAAGACTGCCGGTGGTATTGGTCTCC 781437 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | ||| | ||||| || ||| | || || || |||||| | | | | Sbjct 781438 ACATCCACAACATTCGTGCCAAGGGCTCGTACATTGCCGGAACCAACGGCTACTCTAACG 781497 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||||| || ||||| || | || | || || || || ||||| |||||||||| Sbjct 781498 GTATCGTTCCCATGCTTCGTGCCTACGACGCTACCGCTCGTTACGTTGACCAGGGTGGCA 781557 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| ||| | |||||||||||||||||||| |||||||||||||| | || | Sbjct 781558 ACAAGCGCCCGGGTGCCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATCTTCGACT 781617 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671 | || || || ||| ||| || || | || ||| | || ||||||||| || ||| Sbjct 781618 TCCTGGACCTCCGTAAGAACCATGGAAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTAC- 781676 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| | |||||||||||| | || ||| |||| || ||| ||| Sbjct 781677 GCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCTGACGGTGACTGGACCCTC 781736 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 ||||||||| |||||||| |||||| | ||| || |||||||| | || || Sbjct 781737 ATGTGCCCGGCTGAGTGCCCTGGCCTCGCCGACGTCCACTCCGAGGAGTTCGAGAAGCTG 781796 Query 53792 TATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 || || ||| || | | |||| ||| |||| | ||||| | || Sbjct 781797 TACGAGAGCTACGAGCGTGCCGGTAAGGGTCGC------AAGACCATTAAGGCCCAAAAG 781850 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| || ||||| || ||| ||||| || || | |||| ||||||| Sbjct 781851 CTCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGGTGGTCCCTTCATGCTCTACAAG 781910 Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 || | | |||| ||| ||||||| || || ||||| |||||| ||| Sbjct 781911 GACGCTGCCAACCGCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCG 781961 Score = 123 bits (136), Expect = 3e-23 Identities = 551/856 (64%), Gaps = 40/856 (5%) Strand=Plus/Plus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| | ||||| ||||| | || ||||| || || ||||| ||| ||||||| Sbjct 782073 GACTTCAAGAAGCTCCACGAGATCACCAAGGTTGTCACCCGCAACCTTGACCAGGTCATC 782132 Query 55157 GACAAG-AATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCAT 55215 || | || |||||||| | ||||||||| || ||| | || ||||| ||| | Sbjct 782133 -ACTCGCAACTACTACCCCGTCCCCGAGGCGCGCAACTCGAACATGCGCCACCGCCCCGT 782191 Query 55216 CGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTC 55275 || ||||||| ||||| | ||||||| ||||||| ||| | ||||||||||||| Sbjct 782192 CGGTCTCGGTGTCCAGGGTCTCGCCGACACCTTCATGGCTCTCCGCATGCCCTTCGACTC 782251 Query 55276 GGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCG 55334 | ||||| | |||||| | |||||| || | ||||||| || || |||| Sbjct 782252 GCGCGAGGCTCGCCAGCTTAACCTCCAGATCTTCGAGAC-CATCTACCACGCCGCCCTCG 782310 Query 55335 AGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAG 55394 ||| ||||| | |||| || || | ||| ||| | | ||||| Sbjct 782311 AGGCCTCGTGCGAGATGGCCCAGAAGCTCGGCAAGTACCCCTCGTACGAGGGCTCGCCCA 782370 Query 55395 CTGACA-AGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCCCA------TGTTT 55447 || | |||| ||||| ||| || |||||| ||| || |||| | | Sbjct 782371 -TGTCGCAGGGCAAGATCCAGCCCGACCTCTGGGGC--GTC-GAGCCCACCGACCTCTGG 782426 Query 55448 GACAAGTTGAAGCA---TG---ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTG 55501 ||| | ||| || ||||| | | ||| | |||||||| || ||||| Sbjct 782427 GACTGGACTGAGCTCCGTGCCAACATTGCCCAGCACGGCGTCCGCAACTCGCTCCTCGTT 782486 Query 55502 GCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCG 55561 || || ||||| || || || || | |||||| | ||| |||||| |||||||| Sbjct 782487 GCCCCCATGCCTACTGCCTCTACCTCGCAGATCCTTGGCTGGAACGAGTGCTTCGAGCCT 782546 Query 55562 TACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAG 55621 ||||| | | ||||| |||||| ||| | ||||| || | | || | Sbjct 782547 TACACCTCGATGCTCTACTCGCGCCGTGTCCTGTCTGGTGACTTCGCGGTTGTCT----G 782602 Query 55622 CACCTCG----TCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGA--CG 55675 | ||| | | ||| || || || | ||| || | |||| |||| | Sbjct 782603 CCCCTGGCTTCTTCGCGACTTGATCAACCTCGGAATTTGGGACGAGGAGATGAAGAACCT 782662 Query 55676 GAT-ATTG-TGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGATTCCTCTGCGTCTCA 55730 || |||| | | ||| || ||| ||||| || | | |||||| ||| Sbjct 782663 CATCATTGCTTC----CGGTGGCTCCATCCAGCATATCCCCAACATTCCTGATGACATCA 782718 Query 55731 AGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTG 55790 ||| |||||| ||| || |||||||| | |||||| | || ||| | ||| | Sbjct 782719 AGGCCATTTACAAGACTGTCTGGGAGATCTCGCAGAAGGCGGTTATCGACCTCGCTGCCG 782778 Query 55791 ATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCAC 55850 | ||||| |||| |||||||||||| ||||| || |||||| | | | ||| || || Sbjct 782779 ACCGTGGAGCGTTCATCGACCAGTCGCAGTCGCTCAACATCCACCTCGCGAACCCCTCGT 782838 Query 55851 TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGT 55910 | || || | | |||||||||||| ||||| |||||| ||||||||||| ||| | Sbjct 782839 TCTCCCAGCTCACCTCGATGCACTTCTACGGCTGGAAGCGTGGACTCAAGACTGGTGCCT 782898 Query 55911 ACTATCTGCGGACCCG 55926 |||| || || ||||| Sbjct 782899 ACTACCTCCGCACCCG 782914 >seq1 Length=4053335 Score = 129 bits (142), Expect = 6e-25 Identities = 300/450 (67%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || || || || ||||||| || || || ||||| | |||| || Sbjct 3182037 CCGGTGCCGATACCATCCGCTCCGTTGATCAGAACCAGGGGAACCACAGGCATGTAGTAC 3182096 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | ||||| || || || | || ||||| | | | ||| || Sbjct 3182097 TCGGGCTCAATGTGCAGTCCCTCCTCGAACAGGTTGTTGAGGATGGGCTCGTCCGCTGGG 3182156 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| ||| | ||| | | | || |||| ||||||||||| || |||||| Sbjct 3182157 TGGAAGATGGTGCGGGTGATGCGCGACACGCTAGTGTGAATGTAACGAGCACTGGCAGCA 3182216 Query 117332 TCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 || || ||||| |||| |||||||||||| || || || ||| |||||| | ||| Sbjct 3182217 TCTTTACCACCTTGCAA-ACGCGTACCGAACTGACCGTGGGGAGCCAGGAGGTTGACGTT 3182275 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450 |||| ||| | |||||||| || | ||| ||||| | || || |||||| Sbjct 3182276 GTTGCTGCCAATGAAGTTTTGCGCAAGACCGACGATCGTCGAGTACAGAGACGTCTCACC 3182335 Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGA 117510 || || || || || | |||| | ||| || | | ||| |||||| || | Sbjct 3182336 GTGATGGTAGGCTGTGTTCTCCAAAATGTAACCGACGATCTGCTGCACCTTGATCTGGTT 3182395 Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 | | | || ||||||| || || | || ||||||||||||| |||||||| || || Sbjct 3182396 CTTGATCTTTTTCTTGAAACAACCAAAGATGACCTTGCGCTGACCCGGCTTCAGGCCGTC 3182455 Query 117571 CGCCACGTGAGGGATCGAACGCTTGATGTC 117600 ||| || || || ||||| || |||| Sbjct 3182456 CGCAACCGACGGAATGGAACGAATGTTGTC 3182485 Score = 120 bits (132), Expect = 3e-22 Identities = 297/451 (66%), Gaps = 0/451 (0%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 ||||||| ||||| || || || ||||||| ||||| || || || | ||| ||| Sbjct 3182035 ATCCGGTGCCGATACCATCCGCTCCGTTGATCAGAACCAGGGGAACCACAGGCATGTAGT 3182094 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 |||| ||||| | || | || || || | || || || | | || | ||| || | Sbjct 3182095 ACTCGGGCTCAATGTGCAGTCCCTCCTCGAACAGGTTGTTGAGGATGGGCTCGTCCGCTG 3182154 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 | | ||| || || || || | || | ||| ||||| || | ||||| | Sbjct 3182155 GGTGGAAGATGGTGCGGGTGATGCGCGACACGCTAGTGTGAATGTAACGAGCACTGGCAG 3182214 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 |||| || |||||| || ||||| || ||||| || ||| | |||||||||| || Sbjct 3182215 CATCTTTACCACCTTGCAAACGCGTACCGAACTGACCGTGGGGAGCCAGGAGGTTGACGT 3182274 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 ||||| ||| | ||| || || || | | || ||||| | |||| || |||| Sbjct 3182275 TGTTGCTGCCAATGAAGTTTTGCGCAAGACCGACGATCGTCGAGTACAGAGACGTCTCAC 3182334 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 |||| || || || || | |||| ||||| || | | |||| |||||| || | Sbjct 3182335 CGTGATGGTAGGCTGTGTTCTCCAAAATGTAACCGACGATCTGCTGCACCTTGATCTGGT 3182394 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293 || | | || ||||||| ||| | | || ||||||||||| || |||| |||| Sbjct 3182395 TCTTGATCTTTTTCTTGAAACAACCAAAGATGACCTTGCGCTGACCCGGCTTCAGGCCGT 3182454 Query 152294 CCACCACGTGAGGAATCGAACGCTTGATGTC 152324 || | || ||||| ||||| || |||| Sbjct 3182455 CCGCAACCGACGGAATGGAACGAATGTTGTC 3182485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215753752800