Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 309 3e-79 seq12 150 2e-31 seq1 141 1e-28 seq20 105 8e-18 >seq3 Length=2330021 Score = 309 bits (342), Expect = 3e-79 Identities = 806/1222 (66%), Gaps = 13/1222 (1%) Strand=Plus/Minus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||| | |||| |||| | |||||| |||| || || ||| || ||| |||| Sbjct 782404 CCCCAGAGGTCGGGCTGGATCTTGCCCTGCGACATGGGCGAGCCCTCGTACGAGGGGTAC 782345 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 ||| | ||| ||||| ||| ||||| || ||||| ||||| || ||| ||| Sbjct 782344 TTGCCGAGCTTCTGGGCCATCTCGCACGAGGCCTCGAGGGCGGCGTGGTAGATGGTCTCG 782285 Query 80659 AAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718 |||| ||| | ||| |||| | |||||| | || || | |||| Sbjct 782284 AAGATCTGGAGGTTAAGCTGGCGAGCCTCGCGCGAGTCGAAGGGCATGCGGAGAGCCATG 782225 Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCG 80777 || ||| || || ||||| || |||| ||| |||||||||||| ||||||| | | Sbjct 782224 AAGGTGTCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTG 782165 Query 80778 CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837 | || |||| || | ||||| |||| | |||||| ||| |||||||| || || Sbjct 782164 CGCG-CCTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGAC 782106 Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA----TTGGTTCCCC--TTCACAAA 80891 |||| || | || || || |||| |||||| | ||||| | || || || Sbjct 782105 AACCTTGGTGATCTCGTGGAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAA 782046 Query 80892 TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 || || || | || || || ||||||||||| ||||| |||| | |||| Sbjct 782045 GGCGGGGAGAGCGATCGAGGCAAGGTTGCACACGGCAACCTCGTCAGGGGACGAGTACTC 781986 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 || ||| || ||||| | || || ||||| || || || |||| | |||||| ||||| Sbjct 781985 GATGATCTCAGTGCAGAGGTTCGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTT 781926 Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071 | |||| ||||||||||||| |||| | || |||||||||| ||| | || || Sbjct 781925 GCGGTTGGCAGCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAG 781866 Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131 ||||||| ||| | || | ||||| | |||||| || || | | | || Sbjct 781865 GATGGCGAACCAGAGCTTTTGGGCCTTAATGGTCTTGCGACCCTTACCGGCACGCTCGTA 781806 Query 81132 CTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGT 81190 | |||| |||||| ||||||| | ||| | || | |||| | |||||||| Sbjct 781805 GCTCTCGTACAGCTTC-TCGAACTCCTCGGAGTGGACGTCGGCGAGGCCAGGGCACTCAG 781747 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 |||||||| ||| |||||| ||| ||| ||| ||||||||| ||| | || Sbjct 781746 CCGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAGA 781687 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCA 81310 ||||||||||| ||| ||||| ||| || ||||||| | || ||||| || | Sbjct 781686 TCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCATGGTTCTTACGGA 781627 Query 81311 ACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCT 81370 || || ||||| | |||||| || ||||| ||||| || || | ||||| | ||| Sbjct 781626 GGTCCAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCACCCG 781567 Query 81371 TGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAG 81427 ||| ||||||||||| |||||||| || || |||| | |||| | ||| | Sbjct 781566 GGCGCTTGTTGCCACCCTGGTCAACGTAACGAGCGGTAGCGTCGTAGGCACGAAGCATGG 781507 Query 81428 GGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCT 81487 | | |||||| | || | ||||| || || | || ||| |||||||| || | | Sbjct 781506 GAACGATACCGTTAGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCTTGGCACGAATGT 781447 Query 81488 TGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGG 81547 || ||| ||||| || ||||| | ||| || ||||||||||| || | | Sbjct 781446 TGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCACAGGTCTTGAGAG 781387 Query 81548 TCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCT 81607 | || || || || || ||| || | |||||| | | | ||| ||| ||||||| Sbjct 781386 TGTCGTAGATACCGTCAATGGAGTCCTCCTTCATGGCGACGAGGAAGCAGGACGACATCT 781327 Query 81608 GAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTG 81667 | | | | ||| | ||||| || || || | ||||| |||| || || | Sbjct 781326 GGGCGTGGGGGGTGCCCGAGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGC 781267 Query 81668 ACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTA 81727 ||| |||| ||||| || |||| ||| || |||||||| ||||| | | | Sbjct 781266 TCATGAGGTTGTAGGTCTCGATGACCTTCTCAATGTCATCACCGTGGATACCAACGGAAA 781207 Query 81728 CACGCATAAACATGTACTGGGG 81749 ||||||| | ||||| |||||| Sbjct 781206 CACGCATGAGCATGTGCTGGGG 781185 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| || ||||||||||| || ||||| ||||| ||||| Sbjct 19931 AATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTC 19990 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||| | || ||||||||||||||||| |||||||| ||||| Sbjct 19991 CGACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCA 20050 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || ||||| || ||||| | || ||||| | ||||| || Sbjct 20051 GCAGCGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAA 20110 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || ||||| || | ||||| |||||||| Sbjct 20111 CATCCAGAAGGAGTCGACGCTCCATCTCGTTCTCCGTCTCCGCGGTGG 20158 Score = 178 bits (196), Expect = 1e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 20387 AATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCCTC 20446 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | || ||||| | || ||||||||||||||||| ||||| || ||||| Sbjct 20447 GGACACTATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCA 20506 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || |||||||| ||||| || ||||||| ||||| || | ||||| || Sbjct 20507 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGTACGCTCTCGGACTACAA 20566 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| ||||| ||||| || ||| | ||||| || || ||||| Sbjct 20567 CATTCAGAAGGAGTCCACCCTTCACCTCGTCCTTCGTCTCCGTGGAGGACA 20617 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| || ||||| || || || ||||||||||| Sbjct 20160 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 20219 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||| | || || |||||||||||||| ||||| || |||||| Sbjct 20220 GACACGATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 20279 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| || ||||| | || || || | ||||| || Sbjct 20280 CAGCGTCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 20339 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || || ||||| || ||| | ||||| || |||||| Sbjct 20340 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTTCGTCTGCGTGGTGGA 20387 Score = 120 bits (132), Expect = 3e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAAT 27480 ||||| || ||||||||||| || || || ||||| ||||| || | ||| | || Sbjct 19669 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCAGACACCATCGACAAC 19728 Query 27481 TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTT 27540 | ||| | || || || ||||||||||| || ||||| |||||||||||||| ||||| Sbjct 19729 GTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATTTTC 19788 Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 ||||| ||||| || ||||| | |||||| || | ||||| Sbjct 19789 GCTGGAAAGCAGCTTGAGGACGGTCGTACGCTTTCTGACTA 19829 >seq12 Length=680385 Score = 150 bits (166), Expect = 2e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || |||||||| || ||||||||||| ||||| || | ||| | || | ||| Sbjct 281839 CTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAG 281898 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || || || |||||||||||||| || || ||||| Sbjct 281899 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGC 281958 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || || Sbjct 281959 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 282018 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||| | |||||||||||||| Sbjct 282019 CACCTTGTCCTCCGTCTTCGCGGTGG 282044 >seq1 Length=4053335 Score = 141 bits (156), Expect = 1e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || ||||| ||||| |||||||| ||||| ||||| || | ||| | || | ||| Sbjct 1442302 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1442361 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| ||||| || |||||||||||||| || || || || Sbjct 1442362 TCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1442421 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || || Sbjct 1442422 AAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1442481 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||| | ||||| || ||||| Sbjct 1442482 CACCTCGTCCTCCGTCTCCGTGGTGG 1442507 Score = 87.8 bits (96), Expect = 2e-12 Identities = 288/443 (65%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022 || |||||||| || ||||||||||| ||||| ||||||||||| || | | Sbjct 3182476 CGTTCCATTCCGTCGGTTGCGGACGGCCTGAAGCCGGGTCAGCGCAAGGTCATCTTTGGT 3182417 Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCT-GTCGGGCTACGTGGC 32081 || ||||||| || | || | || |||||| |||| | ||| || ||| | Sbjct 3182416 TGTTTCAAGAAAAAGATCAAGAACCAGATCAAGGTGCAGCAGATCGTC-GGTTACATTTT 3182358 Query 32082 AGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGC 32141 ||| | || ||||| || ||||| ||| |||| || | || || ||| ||||| Sbjct 3182357 GGAGAACACAGCCTACCATCACGGTGAGACGTCTCTGTACTCGACGATCGTCGGTCTTGC 3182298 Query 32142 TCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGAC 32201 || ||||| | || || ||| | ||| | || | || || ||||| || || Sbjct 3182297 GCAAAACTTCATTGGCAGCAACAACGTCAACCTCCTGGCTCCCCACGGTCAGTTCGGTAC 3182238 Query 32202 CCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCGCA 32259 || | ||||| || |||||||| || | |||||||| ||| ||| |||| Sbjct 3182237 GCGTTTGCAAGGTGGTAAAGATGCTGCCAGTGCTCGTTACATTCACACTAGCGTGTCGCG 3182178 Query 32260 CCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGAT 32319 | | || |||| || ||| |||| ||||||| | | ||||| || || || Sbjct 3182177 CAT--CACCCGCACCATCTTCCACCCAGCGGACGAGCCCATCCTCAACAACCTGTTCGAG 3182120 Query 32320 GACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAAC 32379 || || | || | ||||| | || ||||| || ||| |||| || | || | ||| Sbjct 3182119 GAGGGACTGCACATTGAGCCCGAGTACTACATGCCTGTGGTTCCCCTGGTTCTGATCAAC 3182060 Query 32380 GGTGCAGAAGGCATCGGAACGGG 32402 || || || || ||||| || || Sbjct 3182059 GGAGCGGATGGTATCGGCACCGG 3182037 >seq20 Length=206136 Score = 105 bits (116), Expect = 8e-18 Identities = 169/242 (70%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 64627 CTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGG 64686 |||||| ||| || ||||| | ||| | | || ||||| || ||||| |||| Sbjct 117984 CTGTTCCAGGCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCCGC 118043 Query 64687 TGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAA 64743 ||||| | | | | |||||||| || |||| || ||||| || || || Sbjct 118044 TGGATCTCGGACCAGCGTTCGTCGTTCGGCGAGCGCCTTATCGCTTTCGCTGCCGTCGAG 118103 Query 64744 GGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATG 64803 || || ||||| ||||| || || || || |||||||| || ||||| || || ||| Sbjct 118104 GGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATG 118163 Query 64804 CCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTT 64863 || ||||| | || ||||||||||| ||||| || |||||||| |||||| || ||| Sbjct 118164 CCCGGTCTCACCTTCTCGAACGAGCTCATCTCGCGCGACGAGGGTCTCCACACCGACTTT 118223 Query 64864 GC 64865 || Sbjct 118224 GC 118225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310143360320