Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 136 3e-27 seq1 102 7e-17 seq12 96.9 3e-15 >seq3 Length=2330021 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| ||||||||| | || ||||| || || || ||||| Sbjct 19932 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 19991 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| || ||||| || Sbjct 19992 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 20051 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || ||| | ||| | ||||| |||||| Sbjct 20052 CAGCGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAAC 20111 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | ||| | ||| | || ||||| || Sbjct 20112 ATCCAGAAGGAGTCGACGCTCCATCTCGTTCTCCGTCTCCGCGGTGGTAT 20161 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | || || || || || || |||| Sbjct 20160 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 20219 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || || || || ||||| || Sbjct 20220 GACACGATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 20279 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || |||| ||| | || | || || |||||| Sbjct 20280 CAGCGTCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 20339 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| |||| ||||| || Sbjct 20340 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTTCGTCTGCGTGGTGGAAT 20389 >seq1 Length=4053335 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||| ||| | |||||||| || || || | || ||| | || || | ||||| Sbjct 1442302 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1442361 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || ||||| || ||||| || |||||| | || | ||||||| Sbjct 1442362 TCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1442421 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| | ||||| |||||||| || |||||||||||| | Sbjct 1442422 AAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1442481 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || ||||| || Sbjct 1442482 CACCTCGTCCTCCGTCTCCGTGGTGGTAT 1442510 >seq12 Length=680385 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 ||||| |||||| | || |||||||| || || | |||||| | || || | ||||| Sbjct 281839 CTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAG 281898 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || || || || || || || |||||| | || | ||| ||| Sbjct 281899 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGC 281958 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| |||| || |||||||| || |||||||||||| | Sbjct 281959 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 282018 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGG 27214 || | || | ||| | || ||||| Sbjct 282019 CACCTTGTCCTCCGTCTTCGCGGTGG 282044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918204286720