Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq14 141 8e-29 >seq14 Length=350055 Score = 141 bits (156), Expect = 8e-29 Identities = 283/414 (68%), Gaps = 33/414 (8%) Strand=Plus/Plus Query 6628 CATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCC 6687 ||||| |||||||||||| || ||||||||||||||||| || | || | ||| | Sbjct 231546 CATGTGCGTGAGCAGAGCATACGAGGCAATGTTGAACGGCACGCCAAGTCCAACGTCACA 231605 Query 6688 CGATCGTTGATAGAGCTGGCAGGACAG---------CTCCCCAT-----TCGCG------ 6727 || || || || | ||||||| || ||| || | || | Sbjct 231606 AGAGCGCTGGTACATGAGGCAGGAGAGACCGGGCTTCTCGCCCTCAGACTCAGGGAGATG 231665 Query 6728 -ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||| |||| ||||||| |||||||||| ||||||||||| || ||||| || ||| Sbjct 231666 CACGAAGAACTGGCAGAACATGTGGCACGGCGGGAGCGCCATGAGCGGGAGGTCGGCCGG 231725 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 |||||| |||| ||| | ||||| |||||| |||||| ||| | || ||| | Sbjct 231726 GTTCCATGCGCTCATGATGATCCGCCTGTCAGTCGGGTTCTCCTTGATCTTG-CGA--AT 231782 Query 6847 GTACT--GC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTC 6903 | ||| || |||||||| | ||||| |||| ||||| | |||| | | ||| Sbjct 231783 GCACTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCGTCCTCGCACGTCTTGTACGT 231842 Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGA 6963 || |||||||| | ||||||||| ||||| ||||| || | |||||| || || | | Sbjct 231843 GGCTCCAAAGTGGCGCCACTGGAAGCCGTACACCGGTCCGAGGTCGCCTTC--CCTGCGG 231900 Query 6964 TGGGAA---CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014 || ||| || ||| ||| || || || |||||| ||| |||||||||| Sbjct 231901 TGCGAAAGGCCGACGC-GGTCGAGGAATTCGCGAGACGCGTTGCCGTCCCAGAT 231953 Score = 141 bits (156), Expect = 8e-29 Identities = 283/414 (68%), Gaps = 33/414 (8%) Strand=Plus/Minus Query 34331 ATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG---TTCCCATCTCGG 34387 |||||||||| ||| |||||| || || || ||| ||| || ||| || | | | Sbjct 231953 ATCTGGGACGGCAACGCGTCTCGCGAATTCCTCGACC-GCGTCGGCCTTTCGCACCGCAG 231895 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 | || |||||| | || ||||| ||||| ||||||||| | |||||||| || ||| Sbjct 231894 G--GAAGGCGACCTCGGACCGGTGTACGGCTTCCAGTGGCGCCACTTTGGAGCCACGTAC 231837 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCT-GC--AGTACGTGATC 34504 | | |||| | ||||| |||| ||||| | |||||||| || ||| | | || Sbjct 231836 AAGACGTGCGAGGACGACTACACGGGCCAGGGCGTCGACCAGCTCGCCGAGTGCAT--TC 231779 Query 34505 GACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAG 34564 | || | ||| |||||| |||||| ||||| | ||| |||| ||||||||| Sbjct 231778 G-CAAGATCAAGGAGAACCCGACTGACAGGCGGATCATCATGAGCGCATGGAACCCGGCC 231720 Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT------- 34617 || ||||| || ||||||||||| |||||||||| ||||||| |||| ||| Sbjct 231719 GACCTCCCGCTCATGGCGCTCCCGCCGTGCCACATGTTCTGCCAGTTCTTCGTGCATCTC 231660 Query 34618 CGCGA-----ATGGGGAG---------CTGTCCTGCCAGCTCTATCAACGATCGGGAGAC 34663 | || | || ||| || ||||||| | || || || || | ||| Sbjct 231659 CCTGAGTCTGAGGGCGAGAAGCCCGGTCTCTCCTGCCTCATGTACCAGCGCTCTTGTGAC 231600 Query 34664 ATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717 | || | || ||||||||||||||||| || |||||||||||| ||||| Sbjct 231599 GTTGGACTTGGCGTGCCGTTCAACATTGCCTCGTATGCTCTGCTCACGCACATG 231546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262198281920