Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 138 3e-27 seq3 127 5e-24 seq1 118 3e-21 >seq12 Length=680385 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | |||||||||||||| || || || || |||| ||||| || | | || Sbjct 282038 CGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 281979 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| || || || ||||| || || ||||| Sbjct 281978 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCC 281919 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||||||||| |||| || || || | Sbjct 281918 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGA 281859 Query 225673 GTGATCGTCTTGCCCGTCA 225691 ||||| ||||||||||||| Sbjct 281858 GTGATGGTCTTGCCCGTCA 281840 >seq3 Length=2330021 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || || | ||||| || | | || | ||||| Sbjct 20599 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCC 20540 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 20539 TCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 20480 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||| ||||| |||| || || || | |||||||||| Sbjct 20479 TGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTC 20420 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | || || | ||| | |||||| Sbjct 20419 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || | | || | || || Sbjct 20371 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 20312 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || || || |||||||| |||||||| |||||||| Sbjct 20311 TCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 20252 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| || | || || || | |||||||||| Sbjct 20251 TGGATCTTCGACTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTC 20192 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | || || | ||| | ||||| Sbjct 20191 TTACCCGTAAGGGTCTTGACGAAGATCTGCAT 20160 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| || || || || |||| ||||| |||| || || | || || Sbjct 20143 AGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 20084 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || |||||||| || || |||||||| ||||| || |||||||| Sbjct 20083 TCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 20024 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 20023 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 19964 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||| || | || | |||||| Sbjct 19963 TTGCCGGTGAGAGTCTTCACAAAGATCTGCATT 19931 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| |||||||| || || || || |||||||| || ||||| ||| Sbjct 19811 CCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGAGGGATACCCTCC 19752 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||||||||| ||| || |||||||||||||| | || || || | ||| Sbjct 19751 TTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGACGACTCGACCTCGAGGGTG 19692 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 19691 ATGGTCTTGCCGGT 19678 >seq1 Length=4053335 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| |||| | || | || || Sbjct 1442492 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1442433 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| ||||| || |||||||| Sbjct 1442432 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1442373 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| || || || | || || ||| Sbjct 1442372 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTC 1442313 Query 225682 TTGCCCGT 225689 || || || Sbjct 1442312 TTACCGGT 1442305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530649944984