Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 188 1e-42 seq12 147 5e-30 seq1 147 5e-30 seq20 86.0 1e-11 >seq3 Length=2330021 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| ||||| || || || | ||| || || |||||||||||||| | Sbjct 20386 CCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 20327 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || |||||||| || | ||| || ||||| ||| Sbjct 20326 AGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGA 20267 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || ||| | ||||| |||||||| | || || Sbjct 20266 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATCGTGTCCGACGACTCAACC 20207 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||||||||| | ||||| ||||| |||||||| Sbjct 20206 TCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 20160 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | ||| || || || ||||||||||| | Sbjct 20614 CCTCCACGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAG 20555 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || |||||||| || || || || |||||||||| || || |||||| ||| Sbjct 20554 AGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGA 20495 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | |||||||||||||| | ||||| Sbjct 20494 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACC 20435 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || ||||||||||| || || | ||||| ||||| ||||||||| Sbjct 20434 TCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || ||||| | ||| || || |||||||||||||| | Sbjct 20159 ACCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 20100 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || || |||||||| | ||| || ||||| || Sbjct 20099 CAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGG 20040 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || ||| | ||||| ||||| || | ||||| Sbjct 20039 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGAC 19980 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||||||| ||||| || || | |||||| || || ||||||||| Sbjct 19979 CTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATT 19931 Score = 120 bits (132), Expect = 6e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||||| |||||| || || ||||| || || || || || || || | ||| || | Sbjct 19831 TGTAGTCAGAAAGCGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCT 19772 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || ||||||||||||||||||||||| | || ||| | ||||| ||||| | Sbjct 19771 GGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCTG 19712 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085 | | ||||| ||||| ||||| ||||| || || | |||||| Sbjct 19711 ACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTA 19668 >seq12 Length=680385 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | || || || |||||||||||||| | Sbjct 282045 ACCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 281986 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || ||||| | ||| || |||||| || Sbjct 281985 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGG 281926 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 281925 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 281866 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || |||||||| ||||| ||||||| Sbjct 281865 CTCAAGAGTGATGGTCTTGCCCGTCA 281840 >seq1 Length=4053335 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 1442508 ACCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1442449 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1442448 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 1442389 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 1442388 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 1442329 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 |||||||| || |||||||| || Sbjct 1442328 CTCGAGAGTAATGGTCTTACCGGT 1442305 >seq20 Length=206136 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 229558 TCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTGGACCACGGAGGAAGTCCCCCTAA 229617 ||||| | ||||| ||||||||| ||| | || |||||| | ||||| || ||| Sbjct 117673 TCTGGCAGATGTACAAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACCTCG 117732 Query 229618 ATGCAGACGTCGTCGACTGGCGCGAGAAACTCAACGACGATGAACGCCATTTCATCAAGC 229677 | ||| || ||||||| | | || || |||||| | || ||| | |||||| ||| Sbjct 117733 CGCCTGACCTCCACGACTGGGACAACAAGCTGAACGACAACGAGCGCTACTTCATCGAGC 117792 Query 229678 ACATTCTCGGGTTTTTTGCAGGTTCCGACGGTATCGT 229714 || | |||| ||||| || | |||||||||||||| Sbjct 117793 ACGTGCTCGCCTTTTTCGCCGCGTCCGACGGTATCGT 117829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738717191544