Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3 149 2e-30 seq12 127 5e-24 seq1 127 5e-24 >seq3 Length=2330021 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| |||||||| || || || ||||| |||||||| || || ||| Sbjct 19935 CAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCCGAC 19994 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct 19995 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAGCAG 20054 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||| || || || | || || |||| || ||| || Sbjct 20055 CGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATC 20114 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||| ||| Sbjct 20115 CAGAAGGAGTCGACGCTCCATCTCGTT 20141 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||| || ||||| || ||| ||| Sbjct 20391 CAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCCTCGGAC 20450 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| || || || || || |||||||| Sbjct 20451 ACTATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAG 20510 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| ||||| || |||||| | || || | || || ||| | Sbjct 20511 CGCCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGTACGCTCTCGGACTACAACATT 20570 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 20571 CAGAAGGAGTCCACCCTTCACCTCGT 20596 Score = 120 bits (132), Expect = 7e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 || || ||||| || || || |||||||||||||| || |||||||||||||| ||| Sbjct 19669 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCAGACACCATCGACAAC 19728 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 ||||| ||||| || ||||| || || |||||||| |||||||| || || || ||| Sbjct 19729 GTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATTTTC 19788 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || ||||| ||||| || || || | || ||| | || || Sbjct 19789 GCTGGAAAGCAGCTTGAGGACGGTCGTACGCTTTCTGACTA 19829 >seq12 Length=680385 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || ||||| || ||||| || ||| ||||||||||| |||||||| Sbjct 281839 CTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAG 281898 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || |||||||| || Sbjct 281899 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGC 281958 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || ||| | || || ||| |||| || || || || || Sbjct 281959 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 282018 Query 178122 CATCTTGT 178129 || ||||| Sbjct 282019 CACCTTGT 282026 >seq1 Length=4053335 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || || || |||||||| || ||| ||||||||||| |||||||| Sbjct 1442302 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1442361 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || || || || |||||||| || || ||||||||||| Sbjct 1442362 TCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1442421 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || || |||| || ||| |||| || || || || || Sbjct 1442422 AAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1442481 Query 178122 CATCTTGT 178129 || || || Sbjct 1442482 CACCTCGT 1442489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730644778984