Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 1e-14 seq3 82.4 6e-11 seq2 82.4 6e-11 >seq9 Length=896563 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| | |||||| | ||||||| || || ||||| Sbjct 20700 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCGAGTTGCTTGCCG 20641 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| ||| | ||| |||||||| ||||| || Sbjct 20640 GCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 20581 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | || |||||||||||||| | || Sbjct 20580 ACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGAGTC 20521 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 20520 TTGACAAAGATCTGCAT 20504 >seq3 Length=3676950 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 23809 ACGTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGG 23868 |||||||| ||||| |||||||| ||||| ||| || ||| | ||||| ||| | Sbjct 1271723 ACGTTGCCGAGGTCACCGACGTGACGCTCGGCGTCGGTGGGACCTCCGTGGTTCTTACCA 1271664 Query 23869 GTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAA 23921 ||||||||| ||| ||||| || || |||||||||||| |||| ||||| Sbjct 1271663 TGGGGGTTAAAATGCGAACCAGCAGAAGTACAGCCGTTGCTGTTGTCACCGAA 1271611 Score = 82.4 bits (90), Expect = 6e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| ||||| || ||||||| ||||| ||||| Sbjct 1426956 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 1427015 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | || |||||||| |||||| || Sbjct 1427016 GCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 1427075 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || | | ||| || || || ||| || | ||| ||||||||||| || Sbjct 1427076 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 1427128 >seq2 Length=4481979 Score = 82.4 bits (90), Expect = 6e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| | ||||| || ||||||| ||||| ||||| Sbjct 720179 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 720120 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | ||| |||||||| |||||| || Sbjct 720119 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 720060 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || | | ||| || || || ||| || | ||||||||||| ||||| Sbjct 720059 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGT 720007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259035318912