Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 416 3e-111 seq3 140 3e-28 seq9 138 1e-27 seq2 131 2e-25 >seq1 Length=4840925 Score = 416 bits (460), Expect = 3e-111 Identities = 581/803 (72%), Gaps = 15/803 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||| ||||||||||||| ||||||| | |||| Sbjct 903036 ATCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTC 902977 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||| ||||||||| | ||||||||||||||||| | |||||| || Sbjct 902976 GCCCCCGACCTCCACGACTGGGACAACAAACTGAACGACAACGAGCGCTACTTCATCGAG 902917 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| || || |||||||| ||||| |||||||||||||| || |||||||| Sbjct 902916 CACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGAGCGC 902857 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | ||||||| | ||||||||||| |||||| ||| Sbjct 902856 TTCTGCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGATG 902797 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCT-CTTCGGA 116931 |||||| | |||||||| | ||| ||| ||| |||||||||||| | ||| | || Sbjct 902796 GAGAACATCCACTCGGAGACGTACTCGCTCCTGATCGACACGTACATCCGCGACAACGCC 902737 Query 116932 GGA--GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | | || || |||| | ||||||||||| || || ||| |||| |||||||| Sbjct 902736 CGCCGGCAGTACC---TGTTCCAGGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCC 902680 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGC 117048 || ||||| || ||||||||| | | | || | || | |||||||||||||| | || Sbjct 902679 GACTGGGCTCTCCGCTGGATCTCGGACC-AGCGTTCGTCGTTCGGCGAGCGCCTCATCGC 902621 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 |||||| ||||||||||| ||||||| || ||| ||||| |||| || |||||||| Sbjct 902620 CTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCCATCTTCTGGCTCAA 902561 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||||||||||||||| || ||| |||||||||||||| | |||||||| Sbjct 902560 GAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGAGGG 902501 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGG 117227 ||||| |||||||||||| |||| |||| ||| | | || ||| | | || Sbjct 902500 CCTGCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTCCGCCGCCGCCCGCACCCCGA 902441 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 | || ||| ||||| ||| || || ||| ||||||||| ||||||||||| | Sbjct 902440 CACG-ATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTCACCGAGG 902382 Query 117288 CGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346 | || || ||| || | || | || || || | |||| || ||||||||||| Sbjct 902381 CCCTCCCCGTGTCGCTCATCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGTTT 902323 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 ||||| ||| | ||||| ||| || | | || ||| || ||| || ||||||| Sbjct 902322 GTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAAGGTCTGGAACTCGTCCAACCCC 902263 Query 117407 CTGGACTTTATGAACCTCATCTC 117429 | ||||| ||| | | ||||| Sbjct 902262 TTCGACTTCATGGAGATGATCTC 902240 Score = 105 bits (116), Expect = 7e-18 Identities = 279/423 (66%), Gaps = 5/423 (1%) Strand=Plus/Minus Query 116779 CGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGA 116838 ||| || |||||| ||||| || || | ||||| || |||||| | ||||| Sbjct 1301418 CGATGGTATCGTCGGAGAGAACCTCATCTCACAATTCGCCACTGAAGTGCAGATCGCCGA 1301359 Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898 ||||| |||||| | || |||| || ||| | || ||| | || | || Sbjct 1301358 AGCGCGAGCCTTCTATGCGTTCCAGACGATGATTGAGCAGGTTCACGCCGAGACCTACAG 1301299 Query 116899 GACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCAT 116958 ||| ||||| || || |||| ||| |||||| | |||| || | || Sbjct 1301298 CCTCCTGATCGAGACATATGTGCAAGACAAGGACGAGAAGGACTTCCTGTTCAAGGGAAT 1301239 Query 116959 CGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAG 117018 |||| || || ||| || | |||||||||| |||||| || | ||| ||| Sbjct 1301238 GGAGAACATTCCCTGCATCCAGAAGAAGGCCGACTGGGCGATGAAGTACATCACCGAT-- 1301181 Query 117019 AGAGGCCGCCTTCGGCGAG-CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTT 117077 || | ||||| ||| ||| || | || ||||| || |||||| | ||||| | Sbjct 1301180 -GATGTGCCCTTCC-CGATACGCTTGATCGCGTTCGCCTGTGTGGAGGGCATTTTCTTCT 1301123 Query 117078 CGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTT 117137 |||| || || || || || ||||| ||||| |||||||||||| || |||| | Sbjct 1301122 CGGGGTCATTTGCAGCAATCTTCTGGCTGAAGAAGCGCGGCCTCATGGGAGGTTTGACCT 1301063 Query 117138 TCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 || |||||||| ||| | | |||||||||||||| |||||| ||||| |||||| Sbjct 1301062 TCTCGAACGAGCTTATCAGCCGAGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTGT 1301003 Query 117198 TCA 117200 || Sbjct 1301002 ACA 1301000 >seq3 Length=3676950 Score = 140 bits (154), Expect = 3e-28 Identities = 146/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 || |||||||| ||||||||| | || ||||| || |||||| | | | |||| |||| Sbjct 1427131 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAA 1427073 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||| |||||| | |||||||| || ||||||| ||| || Sbjct 1427072 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGG 1427013 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| ||||||||| ||||||||||||||||||||| | || || Sbjct 1427012 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCT 1426953 Query 40890 GCATCTAGT 40898 || || || Sbjct 1426952 CCACCTTGT 1426944 >seq9 Length=896563 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| |||||||| |||| ||||| || | Sbjct 20504 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 20563 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| |||||||||||| | ||||| Sbjct 20564 GACACGATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 20622 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| || || || |||| |||||||| ||||||||| Sbjct 20623 GCAGCGTCTCATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACCCTGTCCGACTACAA 20682 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 20683 CATCCAGAAGGAGTCGACCCTTCACCTCGT 20712 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || || ||| | || ||||| | || Sbjct 20732 ATGCAGATCTTCGTCAAGACTCTGACGGGTAAGACGATTACCCTTGAGGTCGAGTCTTCC 20791 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| || ||| | ||||| Sbjct 20792 GACACGATCGACAACG-TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 20850 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| |||||| || ||||| || |||| ||||||||| |||||||| Sbjct 20851 GCAGCGCCTTATCTTCGCGGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCGGACTACAA 20910 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| | || || || || ||| | ||| || | || || Sbjct 20911 CATTCAGAAGGAGTCGACTCTTCACCTTGTGCTCCGCCTGCGTGGTGG 20958 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || |||||||| || || ||||| | || || || | | Sbjct 20960 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 21019 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 21020 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGACCA 21078 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || || | || || ||| |||||||| Sbjct 21079 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGACGTACGCTCTCGGACTACAA 21138 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| || || || Sbjct 21139 CATCCAGAAGGAGTCTACGCTCCACCTGGT 21168 >seq2 Length=4481979 Score = 131 bits (144), Expect = 2e-25 Identities = 144/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || ||||| || |||| ||||| || | |||| | | | |||| |||| Sbjct 720004 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 720062 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| |||||||| ||| | |||||||| || ||||||| ||| || Sbjct 720063 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 720122 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| ||||||||| |||||||||||||||||||||| | || || Sbjct 720123 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 720182 Query 40890 GCATCTAGT 40898 || || || Sbjct 720183 CCACCTCGT 720191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218993912320