Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24]
32 sequences; 24,653,913 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1 416 3e-111
seq3 140 3e-28
seq9 138 1e-27
seq2 131 2e-25
>seq1
Length=4840925
Score = 416 bits (460), Expect = 3e-111
Identities = 581/803 (72%), Gaps = 15/803 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| |||| ||||||||||||| ||||||| | ||||
Sbjct 903036 ATCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTC 902977
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAAG 116752
|| ||| ||||||||| | ||||||||||||||||| | |||||| ||
Sbjct 902976 GCCCCCGACCTCCACGACTGGGACAACAAACTGAACGACAACGAGCGCTACTTCATCGAG 902917
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||||| || || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 902916 CACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGAGCGC 902857
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| ||||| ||| | ||||||| | ||||||||||| |||||| |||
Sbjct 902856 TTCTGCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGATG 902797
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCT-CTTCGGA 116931
|||||| | |||||||| | ||| ||| ||| |||||||||||| | ||| | ||
Sbjct 902796 GAGAACATCCACTCGGAGACGTACTCGCTCCTGATCGACACGTACATCCGCGACAACGCC 902737
Query 116932 GGA--GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
| | || || |||| | ||||||||||| || || ||| |||| ||||||||
Sbjct 902736 CGCCGGCAGTACC---TGTTCCAGGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCC 902680
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGC 117048
|| ||||| || ||||||||| | | | || | || | |||||||||||||| | ||
Sbjct 902679 GACTGGGCTCTCCGCTGGATCTCGGACC-AGCGTTCGTCGTTCGGCGAGCGCCTCATCGC 902621
Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108
|||||| ||||||||||| ||||||| || ||| ||||| |||| || ||||||||
Sbjct 902620 CTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCCATCTTCTGGCTCAA 902561
Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168
||| |||||||||||||||||||| || ||| |||||||||||||| | ||||||||
Sbjct 902560 GAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGAGGG 902501
Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGG 117227
||||| |||||||||||| |||| |||| ||| | | || ||| | | ||
Sbjct 902500 CCTGCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTCCGCCGCCGCCCGCACCCCGA 902441
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
| || ||| ||||| ||| || || ||| ||||||||| ||||||||||| |
Sbjct 902440 CACG-ATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTCACCGAGG 902382
Query 117288 CGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346
| || || ||| || | || | || || || | |||| || |||||||||||
Sbjct 902381 CCCTCCCCGTGTCGCTCATCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGTTT 902323
Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406
||||| ||| | ||||| ||| || | | || ||| || ||| || |||||||
Sbjct 902322 GTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAAGGTCTGGAACTCGTCCAACCCC 902263
Query 117407 CTGGACTTTATGAACCTCATCTC 117429
| ||||| ||| | | |||||
Sbjct 902262 TTCGACTTCATGGAGATGATCTC 902240
Score = 105 bits (116), Expect = 7e-18
Identities = 279/423 (66%), Gaps = 5/423 (1%)
Strand=Plus/Minus
Query 116779 CGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGA 116838
||| || |||||| ||||| || || | ||||| || |||||| | |||||
Sbjct 1301418 CGATGGTATCGTCGGAGAGAACCTCATCTCACAATTCGCCACTGAAGTGCAGATCGCCGA 1301359
Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898
||||| |||||| | || |||| || ||| | || ||| | || | ||
Sbjct 1301358 AGCGCGAGCCTTCTATGCGTTCCAGACGATGATTGAGCAGGTTCACGCCGAGACCTACAG 1301299
Query 116899 GACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCAT 116958
||| ||||| || || |||| ||| |||||| | |||| || | ||
Sbjct 1301298 CCTCCTGATCGAGACATATGTGCAAGACAAGGACGAGAAGGACTTCCTGTTCAAGGGAAT 1301239
Query 116959 CGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAG 117018
|||| || || ||| || | |||||||||| |||||| || | ||| |||
Sbjct 1301238 GGAGAACATTCCCTGCATCCAGAAGAAGGCCGACTGGGCGATGAAGTACATCACCGAT-- 1301181
Query 117019 AGAGGCCGCCTTCGGCGAG-CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTT 117077
|| | ||||| ||| ||| || | || ||||| || |||||| | ||||| |
Sbjct 1301180 -GATGTGCCCTTCC-CGATACGCTTGATCGCGTTCGCCTGTGTGGAGGGCATTTTCTTCT 1301123
Query 117078 CGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTT 117137
|||| || || || || || ||||| ||||| |||||||||||| || |||| |
Sbjct 1301122 CGGGGTCATTTGCAGCAATCTTCTGGCTGAAGAAGCGCGGCCTCATGGGAGGTTTGACCT 1301063
Query 117138 TCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197
|| |||||||| ||| | | |||||||||||||| |||||| ||||| ||||||
Sbjct 1301062 TCTCGAACGAGCTTATCAGCCGAGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTGT 1301003
Query 117198 TCA 117200
||
Sbjct 1301002 ACA 1301000
>seq3
Length=3676950
Score = 140 bits (154), Expect = 3e-28
Identities = 146/189 (77%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769
|| |||||||| ||||||||| | || ||||| || |||||| | | | |||| ||||
Sbjct 1427131 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAA 1427073
Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829
| || || | ||||| ||||| |||||| | |||||||| || ||||||| ||| ||
Sbjct 1427072 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGG 1427013
Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889
||| ||||| || |||| ||||||||| ||||||||||||||||||||| | || ||
Sbjct 1427012 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCT 1426953
Query 40890 GCATCTAGT 40898
|| || ||
Sbjct 1426952 CCACCTTGT 1426944
>seq9
Length=896563
Score = 138 bits (152), Expect = 1e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| |||||||| |||| ||||| || |
Sbjct 20504 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 20563
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || |||| ||||| |||||||||||| | |||||
Sbjct 20564 GACACGATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 20622
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| || ||||| || || || |||| |||||||| |||||||||
Sbjct 20623 GCAGCGTCTCATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACCCTGTCCGACTACAA 20682
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || || || || ||
Sbjct 20683 CATCCAGAAGGAGTCGACCCTTCACCTCGT 20712
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || ||||| || || || ||| | || ||||| | ||
Sbjct 20732 ATGCAGATCTTCGTCAAGACTCTGACGGGTAAGACGATTACCCTTGAGGTCGAGTCTTCC 20791
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || || | ||||| ||||| || ||| | |||||
Sbjct 20792 GACACGATCGACAACG-TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 20850
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| |||||| || ||||| || |||| ||||||||| ||||||||
Sbjct 20851 GCAGCGCCTTATCTTCGCGGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCGGACTACAA 20910
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| ||||||||| | || || || || ||| | ||| || | || ||
Sbjct 20911 CATTCAGAAGGAGTCGACTCTTCACCTTGTGCTCCGCCTGCGTGGTGG 20958
Score = 105 bits (116), Expect = 7e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || |||||||| || || ||||| | || || || | |
Sbjct 20960 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 21019
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| ||||| ||||| | |||||
Sbjct 21020 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGACCA 21078
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || ||||| || || | || || ||| ||||||||
Sbjct 21079 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGACGTACGCTCTCGGACTACAA 21138
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | ||||| || || ||
Sbjct 21139 CATCCAGAAGGAGTCTACGCTCCACCTGGT 21168
>seq2
Length=4481979
Score = 131 bits (144), Expect = 2e-25
Identities = 144/189 (76%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769
||||| || || ||||| || |||| ||||| || | |||| | | | |||| ||||
Sbjct 720004 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 720062
Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829
| || || | ||||| |||||||| ||| | |||||||| || ||||||| ||| ||
Sbjct 720063 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 720122
Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889
||| ||||| || |||| ||||||||| |||||||||||||||||||||| | || ||
Sbjct 720123 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 720182
Query 40890 GCATCTAGT 40898
|| || ||
Sbjct 720183 CCACCTCGT 720191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218993912320
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