Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9 134 1e-26 seq2 114 1e-20 seq3 105 6e-18 >seq9 Length=896563 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| || ||||| |||||||| || || || Sbjct 20700 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCGAGTTGCTTGCCG 20641 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||||||||||||||| ||||| || |||||||||||||| ||| || || Sbjct 20640 GCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 20581 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| | ||||||||||| || | || |||||||| ||||| Sbjct 20580 ACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGAGTC 20521 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 20520 TTGACAAAGATCTGCAT 20504 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| |||||||| || || |||||||| || | || || ||||||| Sbjct 21168 ACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTCG 21109 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| |||||||| |||| || |||||||| |||||||| || ||||||||||| | Sbjct 21108 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGA 21049 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| ||| ||||| | || | ||| || Sbjct 21048 ATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTA 20989 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| |||||||| Sbjct 20988 CCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || ||||||||||| || | ||||| ||||| Sbjct 20941 CACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTCCTC 20882 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| || |||||||| || || || || ||||||||||| Sbjct 20881 AAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTG 20822 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||||||||| | ||| | ||| || Sbjct 20821 GATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGTCTT 20762 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||| || || || |||||||| Sbjct 20761 ACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| ||||| ||| | |||||||||||||| |||||||| ||||| |||||| Sbjct 20381 TCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTG 20322 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||| | ||| ||||| | ||| | Sbjct 20321 TCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATG 20262 Query 118704 GTTTTGCCGGTCAGAGTTTT 118723 || |||||||| || || || Sbjct 20261 GTCTTGCCGGTGAGGGTCTT 20242 >seq2 Length=4481979 Score = 114 bits (126), Expect = 1e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||||||||||| Sbjct 720186 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 720127 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| ||||| || |||||||||||||| || || Sbjct 720126 CTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 720067 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| | ||||||||||| || | || || ||||| Sbjct 720066 CGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGT 720007 Query 118715 CAG 118717 || Sbjct 720006 GAG 720004 >seq3 Length=3676950 Score = 105 bits (116), Expect = 6e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 1426949 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTG 1427008 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||||||||||||||| || || || || ||||||||||| || || Sbjct 1427009 CTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTT 1427068 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | | ||||||||| | ||| | || ||||| || Sbjct 1427069 GGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 1427128 Query 118715 CAG 118717 ||| Sbjct 1427129 CAG 1427131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830230806144