Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq9 134 9e-27 seq2 100 2e-16 seq3 93.3 3e-14 >seq9 Length=896563 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || || ||||| | || || ||||| ||||||||||||||| Sbjct 20730 CCACCGCGCAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20671 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||||| || || ||||| |||||||||||| ||| Sbjct 20670 AGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGG 20611 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| || | || ||||| Sbjct 20610 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 20551 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| ||||| || |||||||||||||| Sbjct 20550 TCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 20504 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||||||| | ||| || ||||| ||||||||||| || Sbjct 21187 TCCTCCACGGAGACGAAGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGA 21128 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| ||| | || || | |||||| || || || || || |||||||||||| || Sbjct 21127 GAGCGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGG 21068 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | | | | || | || | ||| || || Sbjct 21067 GATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAAC 21008 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || || || ||||| || ||||||||||||||||| Sbjct 21007 CTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | ||| || ||||| ||||||||||| || Sbjct 20958 CCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 20899 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||| || || ||||||||||| ||| Sbjct 20898 AGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 20839 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| |||| || ||||| Sbjct 20838 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACC 20779 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || || || || || || ||||| || || ||||||||||| Sbjct 20778 TCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 34212 TGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCT 34271 ||||||| || || ||| |||| || | |||||| || ||||||||||| ||||||| Sbjct 20404 TGTAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCT 20345 Query 34272 GGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGG 34331 ||||| || | || |||||||| ||||| ||| | | | | || | |||| Sbjct 20344 GGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGG 20285 Query 34332 TCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTT 34374 ||| || || || | |||||||| ||||||||||| || || Sbjct 20284 ACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 20242 >seq2 Length=4481979 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| |||| || | ||||||||| ||||| Sbjct 720173 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 720114 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 720113 ATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 720054 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAG 34368 | || | || | || ||||| || | || ||||| || |||||||| Sbjct 720053 TCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGTGAG 720004 >seq3 Length=3676950 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||| || Sbjct 1426926 CCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 1426985 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 1426986 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGG 1427045 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 1427046 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1427105 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAG 34368 || | |||||||| ||||| || || Sbjct 1427106 TCAAGGGTGATGGTCTTGCCCGTCAG 1427131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071874001920