Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq5 86.0 4e-12 >seq1 Length=4840925 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 22761 TGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTC 22820 ||| || ||| | | || || ||||||||||| || || |||||||||||||| || Sbjct 1301142 TGTGGAGGGCATTTTCTTCTCGGGGTCATTTGCAGCAATCTTCTGGCTGAAGAAGCGCGG 1301083 Query 22821 GCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTG 22880 |||||| ||| ||| | || || |||||| | || ||||| ||||| ||||| ||| Sbjct 1301082 CCTCATGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGAGACGAGGGTCTGCACAC 1301023 Query 22881 TGACTTTGCTTGTATGCTGT 22900 ||||| || || |||||| Sbjct 1301022 CGACTTCGCCTGCCTGCTGT 1301003 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 33523 GCCGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGC 33582 |||||||| ||| | |||||||||| | || | ||| | || |||| || Sbjct 2478470 GCCGATGGTCTCAAGTTCGTCAAGATCCGTATCCGATCAACGCGCGTGCCGCAGATCGGT 2478529 Query 33583 GACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTG 33641 ||||||||||| ||| |||||| |||||||| ||| || || | || |||| Sbjct 2478530 GACAAGTTTGCGTCGCGTCACGG-TCAGAAGGGTACGATTGGTATCACTTATCGCCAGGA 2478588 Query 33642 GGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTT 33701 |||||||||||||||||| || ||| | || ||| | ||||||||||||| || | Sbjct 2478589 GGACATGCCGTTCACGGCTGATGGCATTACGCCTGACATCATCATCAACCCGCACGCCAT 2478648 Query 33702 CCCCTCGCGCATGAC 33716 || || || ||||| Sbjct 2478649 TCCGTCTCGTATGAC 2478663 >seq5 Length=1946847 Score = 86.0 bits (94), Expect = 4e-12 Identities = 130/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 33542 TCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCGTTC- 33600 |||||||| | |||| ||| ||| |||||| | ||||||||||| | || | Sbjct 1500134 TCAAGATCCTGACGCGCCAGACGCGCCGCCCAGAGCTCGGCGACAAGTTCTCGTCCCGCC 1500075 Query 33601 ACGGCCCAGAAGGGCACGTGCGGCATGAT-GTACGACCAGTGGGACATGCCGTTCACGGC 33659 |||||| |||||||| ||||||| | || || | | || |||||||||||||| | Sbjct 1500074 ACGGCC-AGAAGGGCGTGTGCGGCCTCATCGTGCCGC-AGCAGGACATGCCGTTCAACGA 1500017 Query 33660 CGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 | | || | ||| ||| | |||| |||||||| | ||||| |||||||||||||| Sbjct 1500016 CCAGGGTATCTGCCCCGACATCATCATGAACCCGCACGGATTCCCGTCGCGCATGACGGT 1499957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233461068896