Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 127 3e-24 >seq1 Length=4840925 Score = 127 bits (140), Expect = 3e-24 Identities = 171/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| |||||| |||||||| | || || ||||| || |||||||| Sbjct 902480 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGG 902539 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| ||||| || ||||| || |||||||| || || ||||| |||||| Sbjct 902540 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAAG 902599 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGCTG-TCATGT 50136 || || || || ||||| ||||| | || | ||| || | || ||||| || Sbjct 902600 ATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGAACGCTGGTCCGAG 902659 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 ||||| ||||||| ||||||||||| || | || || || || || ||||| Sbjct 902660 ATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 902715 Score = 93.3 bits (102), Expect = 6e-14 Identities = 252/380 (66%), Gaps = 8/380 (2%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || || ||||| ||| ||||||||||||||||| || || || ||||| || | Sbjct 1301003 ACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAGA 1301062 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAG 50071 | || | || ||| ||||| ||||| || ||||| || || | ||||||||||| | Sbjct 1301063 AGGTCAAACCTCCCATGAGGCCGCGCTTCTTCAGCCAGAAGATTGCTGCAAATGACCCCG 1301122 Query 50072 AAAAGAAGATTCCTTCTACTGCGGCAAAGGC-AACAAGTCTCTCTCCATAACTGGCGCTG 50130 | ||||| || || || || ||| || || | |||| | | | | ||| | Sbjct 1301123 AGAAGAAAATGCCCTCCACACAGGCGAACGCGATCAAGCGTAT---CGGGAAGGGCAC-A 1301178 Query 50131 TCAT--GT-ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 |||| || || |||| ||||| ||||||||||| | | || || || | || Sbjct 1301179 TCATCGGTGATGTACTTCATCGCCCAGTCGGCCTTCTTCTGGATGCAGGGAATGTTCTCC 1301238 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 || | || || || ||| || || | | |||| ||||| || ||||||| || Sbjct 1301239 ATTCCCTTGAACAGGAAGTCCTTCTCGTCCTTGTCTTGCACATATGTCTCGATCAGGAGG 1301298 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 || || | || | |||| | ||||| | |||| || | ||||| || || Sbjct 1301299 CTGTAGGTCTCGGCGTGAACCTGCTCAATCATCGTCTGGAACGCATAGAAGGCTCGCGCT 1301358 Query 50308 TCGGTAATCTGCACTTCTGT 50327 |||| ||||||||||| || Sbjct 1301359 TCGGCGATCTGCACTTCAGT 1301378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268512692480