Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 109 7e-19 >seq1 Length=4840925 Score = 109 bits (120), Expect = 7e-19 Identities = 167/236 (71%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| |||||| ||||| || | || | ||||| || |||||||| Sbjct 902480 CAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGG 902539 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| ||||| ||||| || ||||| || || ||||| || || ||||| |||||| Sbjct 902540 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAAG 902599 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCACTG-TCATGT 42241 || || || || || || ||||| || || | ||| || | || | ||| || Sbjct 902600 ATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGAACGCTGGTCCGAG 902659 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 ||||| ||||||| ||||||||||| || | || || || || || ||||| Sbjct 902660 ATCCAGCGGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 902715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138931544320