Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 230 3e-55 >seq1 Length=4840925 Score = 230 bits (254), Expect = 3e-55 Identities = 506/749 (68%), Gaps = 27/749 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||| || || ||||| | ||| ||| || | || Sbjct 903036 ATCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTC 902977 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| |||| ||||| | ||| || | ||||| | || || | Sbjct 902976 GCCCCCGACCTCCACGACTGGGACAACAAACTGAACGACAACGAGCGCTACTTCATCGAG 902917 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| |||| || || || ||||||||||| || || || || || Sbjct 902916 CACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGAG-CG 902858 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 |||| ||| | || | |||| | || ||||| ||||| |||||||| Sbjct 902857 CTTCTGCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGAT 902798 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT----- 125312 |||||| | |||||||| | |||||| ||||| |||| |||||| ||||| Sbjct 902797 GGAGAACATCCACTCGGAGACGTACTCGCTCCTGATCGACACGTACATCCGCGACAACGC 902738 Query 125313 CCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 |||| || | || || || | || ||||| || | || | || || ||| Sbjct 902737 CCGC--CGGCAGTACCTGTTCC---AGGCCATCGAGACCATCCCCTGCATCAAGAAGAAG 902683 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| | || |||||| ||| | || |||| || ||| | || | Sbjct 902682 GCCGACTGGGCTCTCCGCTGGATCTCGGACCAGCGTTCGTCGTTCGGCGAGCGCCTCATC 902623 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||||||||| ||||| |||||||| || || || ||| ||||||| |||||| Sbjct 902622 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCCATCTTCTGGCTC 902563 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| ||||||||||| || ||| | |||||| | || || || |||||| Sbjct 902562 AAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGAG 902503 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCA 125610 ||||| ||| ||||||||| || || || |||| || | || |||| | Sbjct 902502 GGCCTGCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTCCGCCGCCGCCCGCACCCC 902443 Query 125611 GATCCAGCGATGAA-AAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 || || |||| || ||| ||||||| || ||||| | ||| || || ||| Sbjct 902442 GA--CA-CGATCAACAAGATCATCAA---------GGAGGCCGTCAAGATCGAGCAGGAG 902395 Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 || || ||||| |||| || || | || ||||||||| |||||| |||||| || Sbjct 902394 TTCCTCACCGAGGCCCTCCCCGTGTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAG 902335 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACT 125758 ||||| |||||||| || || ||||| || Sbjct 902334 TACATCGAGTTTGTCGCGGACCGTCTGCT 902306 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || |||||| || |||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1301153 GCGTTCGCCTGTGTGGAGGGCATTTTCTTCTCGGGGTCATTTGCAGCAATCTTCTGGCTG 1301094 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| |||||| || |||| | |||||| |||| ||||||||| Sbjct 1301093 AAGAAGCGCGGCCTCATGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGAGACGAG 1301034 Query 125553 GGCCTACACTGTGACTTTGCC 125573 || || ||| ||||| ||| Sbjct 1301033 GGTCTGCACACCGACTTCGCC 1301013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058903576320