Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 seq1 84.2 2e-11 >seq2 Length=4481979 Score = 109 bits (120), Expect = 5e-19 Identities = 221/323 (68%), Gaps = 10/323 (3%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||| ||| ||||| || || ||||||||| || |||| ||| |||| | || Sbjct 2539902 CTCGAGGATGAGCTGGGCGATGCGGTCGCCCTCGTTGACCTTGAACTCGTCATCCGAGAG 2539843 Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 |||||| || | || | ||| |||||||||||||| || ||||| ||||| Sbjct 2539842 GTTGAAGAGGATGACCTTGAGCGGGCCACGGTAGTCGGCGTCAATGACGCCGGCGCCGGT 2539783 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATC 5763 || ||| |||||||| |||| |||||||||||||| || ||||| |||||| || Sbjct 2539782 GTGGATCGAGTGCTTGGCCGCAAGGCCGGAGCGGGGTGCAACGCGCCCGTAGGTGCCGAG 2539723 Query 5764 GGGAAGCTGTATCTGCAGGTCCGTGAACACCA----CTCGCCGACCGCCCGCAGGGACGA 5819 ||||| ||| | ||||||| |||| || ||| ||||| |||| |||| Sbjct 2539722 AGGAAGGGCGATCGCAATGTCCGTGTCGACCATGGCCTTGCC--CCGCC--CAGGAACGA 2539667 Query 5820 -TGCAGTCGCAAGCGCTGCAGAGGTCGTACCCGGCCGCCCGCGGGGACCCCCTGGTGGGG 5878 |||| || | | | | |||||| | |||||||| | ||| || | |||||| Sbjct 2539666 CGGCAG-GGCGGGAGGCGTACAGGTCGAATCCGGCCGCGAAGGCGGAGCCGCGCGTGGGG 2539608 Query 5879 AGCGTGGCGTTGGGGGACAGGCG 5901 | || |||||||| | ||||| Sbjct 2539607 ATGGTCGCGTTGGGAGCGAGGCG 2539585 >seq1 Length=4840925 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 |||||| || || || || | ||||||||||||| ||| | ||||| ||||| || Sbjct 2504557 GTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGCAGTCGACGACGCCGGCGCCGAC 2504498 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 ||||||| ||||||| |||| ||||| ||||| || || | ||| ||||| Sbjct 2504497 GTCGATGCCGTGCTTGGCCGCGAGGCCCGAGCGCGGCGCGATGCGTCCGTA 2504447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054232278784