Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24]
32 sequences; 24,653,913 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq9 96.9 3e-15
>seq9
Length=896563
Score = 96.9 bits (106), Expect = 3e-15
Identities = 170/246 (69%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 94764 TTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTT 94823
||| || || ||| ||||||| | | || | |||| ||| | ||||| ||||| |
Sbjct 21203 TTTCAAGGTTCTACTCTCCTCCACGGAGACGAAGAACCAGGTGGAGCGTAGACTCCTTCT 21144
Query 94824 GCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAA 94881
| | ||| || || | || || | |||||| ||||| ||||| ||||||| |
Sbjct 21143 GGATGTTGTAGTCCG--AGAGCGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAG 21086
Query 94882 TCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGAC 94941
| ||||| || ||||| || || || ||||| | ||| || | ||||||| | |||
Sbjct 21085 GCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 21026
Query 94942 AGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGAT 95001
||||| | || || || | |||||| || || || || || || |||||||||||
Sbjct 21025 GGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCACAAAGAT 20966
Query 95002 CTGCAT 95007
||||||
Sbjct 20965 CTGCAT 20960
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || || ||| ||||||| | | ||||| || || || || || || |||
Sbjct 20658 TCCTCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 20599
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || | ||||||| | ||| ||||| | | ||||| || | ||||||
Sbjct 20598 TCCTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATG 20539
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || |||||||| || ||||||||||||||
Sbjct 20538 GTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 20504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291020683520
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |