Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 414 3e-110 seq1 89.7 1e-12 >seq3 Length=3676950 Score = 414 bits (458), Expect = 3e-110 Identities = 1172/1786 (66%), Gaps = 26/1786 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| | ||| |||||||| || ||| | || | || | ||| Sbjct 2183692 TTCGGCTTCAAGACGCTCGAGCGCTCCTACCTCCTCCGCATCGACGGCAAGATCGCTGAG 2183751 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| ||||| ||| | |||||||| | |||||||||| | || |||| Sbjct 2183752 CGCCCCCAGCACATGCTCATGCGTGTCTCCGTTGGTATCCACGGTGACGACATTGAGAAG 2183811 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATG 363570 | ||||| || || || ||| | || | || ||||| |||||| |||| || | Sbjct 2183812 GTCATTGAGACCTACAACCTTATGAGCGAGCGCTACTTCACCCACGCCTCGCCCACTCTC 2183871 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | ||| | || |||| | | |||||||| |||||||| ||| | |||||||| Sbjct 2183872 TTCAACTCGGGTACTCCCCACGCCCAGATGTCGTCTTGCTTCCTTGTCGCCATGAAGGAG 2183931 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || || ||||| || |||| ||||| || |||| ||||| | || ||||||| ||| Sbjct 2183932 GACTCGATCGACGGCATCTACGACACTCTCAAGACCTGTGCCCAGATCTCCAAGACTGCC 2183991 Query 363691 GGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACA 363750 || || || ||| | |||||||| | ||||| || | |||||| ||| || Sbjct 2183992 GGTGGTATCGGTCTCCACATCCACAACATCCGTGCCAAGGGCTCGTACATTGCCGGAACC 2184051 Query 363751 GGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTAC 363810 || |||||||| || | || |||||||| |||| | ||| |||||| | ||| Sbjct 2184052 AACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCTACTGCTCGTTAC 2184111 Query 363811 GTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCAT 363870 |||||||||||||| |||||| || || || ||||| ||||| ||||| || Sbjct 2184112 GTCGACCAGGGTGGCAACAAGCGCCCGGGTGCCTTCGCTATCTATCTTGAGCCCTGGCAC 2184171 Query 363871 GCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCA 363930 ||||| || || || || || || ||||| || ||| ||||| ||||| | ||||| Sbjct 2184172 GCCGACATCTTCGACTTCCTCGACCTCCGTAAGAACCACGGAAAGGAGGAGGTTCGTGCC 2184231 Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGT 363990 ||||| || ||||| || || ||| | || |||| || |||||||| || ||| | | Sbjct 2184232 CGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCCGAC 2184291 Query 363991 AAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGAC 364050 | ||| | ||| | ||||| ||| || || || || |||| || ||| Sbjct 2184292 GGCGACTGGACCCTCATGTGCCCGGCCGAGTGCCCTGGCCTCGCCGACGTCCACTCTGAG 2184351 Query 364051 GACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCC 364110 || | | || ||||| | || || | || |||| ||| ||||| || Sbjct 2184352 GAGTTCGAGAAGCTGTACGAGAGCTACGAGCGTGCCGGCAAGGGTCGCAAGACTATCAAG 2184411 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| ||||| |||||| | || | |||| ||||| || |||| ||| Sbjct 2184412 GCTCAGAAGCTCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGGTGGTCCCTTCATG 2184471 Query 364171 TTGTACAAAGATTCGTGC-AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229 | ||||| || | ||| |||||||||||||||||||||||||| || || || || Sbjct 2184472 CTCTACAAGGACGC-TGCGAACCGCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTC 2184530 Query 364230 GAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | |||||| || || ||||| ||||| ||| | ||||||| ||| |||||| || || Sbjct 2184531 GTCCAACCTCTGCACTGAGATCATTGAGTACTCGTCTCCCGATGAGGTTGCCGTGTGCAA 2184590 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA-----AGA-TGGTACTTTTGACCACCA 364343 |||||| |||||||| || || || || || || ||| || | ||| | | Sbjct 2184591 CCTTGCCTCGATCGCCCTCCCTGCCTTCGTCAACTTCGAGACCAAGACCTACGACTTCAA 2184650 Query 364344 GCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG-A 364402 | | || | || | ||| | | || |||| || ||| |||| ||| || | | Sbjct 2184651 GAAGCTGCACGAGATCACCAAGGTCGTCACCCGCAACCTTGACCAGGTCATC-ACTCGCA 2184709 Query 364403 ATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTGGTCTT 364461 | || || || | || | || || || || || ||||| || ||||| | ||||| Sbjct 2184710 ACTACTACCCCGTCCCCG-AGGCGCGCAACTCGAACATGCGCCACCGCCCCGTCGGTCTC 2184768 Query 364462 GGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGAC 364521 ||||| ||||| ||||| ||| || ||| ||| ||| | || || |||| ||| Sbjct 2184769 GGTGTCCAGGGTCTCGCCGACACCTTCATGGCCCTCCGCATGCCCTTCGACTCGCGTGAG 2184828 Query 364522 GCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCG 364581 ||||| || || ||||||| || || || || || || | |||||| Sbjct 2184829 GCTCGCCAGCTCAACCTCCAGATCTTCGAGACCATCTACCACGCTGCCCTCGAGGCTTCG 2184888 Query 364582 TGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAG 364641 || || |||| | | || |||||| | | |||||||| || || | |||||| Sbjct 2184889 TGCGAGATGGCCCAGAAGCTCGGCAAGTACCCCTCGTATGAGGGTTCGCCCATGTCGCAG 2184948 Query 364642 GGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACG 364701 || || ||||| || || ||| || ||| | | || ||| ||||| | | Sbjct 2184949 GGCAAGATCCAGCCCGACCTCTGGGGCGTTGAGCCCACCGACCTCTGGGACTGGACTGAG 2185008 Query 364702 CTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCC 364761 || || ||||| || |||| ||| |||||||| ||| || || ||||||||| Sbjct 2185009 CTCCGCGCCAACATTGGCCAGCACGGTGTCCGCAACTCGCTCCTTGTTGCTCCCATGCCC 2185068 Query 364762 ACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAAT 364821 || || || || | ||||||||||| |||||||||||||| || | || | Sbjct 2185069 ACTGCCTCCACCTCGCAGATCCTCGGCTGGAACGAGTGCTTCGAGCCCTACACCTCGATG 2185128 Query 364822 CTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG-TCAA 364880 ||||| || ||||| || || || || || || |||| | || | ||| | || Sbjct 2185129 CTTTACTCGCGCCGTGTCCTGTCTGGTGACTTCGCGGTCG----TATGCCCCTGGCTCCT 2185184 Query 364881 G---GATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGC 364937 | || | | ||| ||| | |||| || ||||||||| |||||||| | Sbjct 2185185 GCGCGACTTGATCAACCTCGGCATCTGGGACGAGGAGATGAAGAACCTCATCATCGCTTC 2185244 Query 364938 TAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAAC 364997 || || | ||| |||| || | || || || | ||| | || ||||| || Sbjct 2185245 CGGCGGCTCCATTCAGCACATCCCCAACATCCCCGATGACATCAAGGCCATCTACAAGAC 2185304 Query 364998 CGTATGGGAAATTTC-CATGCGAA--CTCTCATTGATATGGCGGCCGATCGCGGTGCTTT 365054 || ||||| || || || ||| | | || || | || ||||| || || || || Sbjct 2185305 TGTCTGGGAGATCTCGCA---GAAGGCGGTTATCGACCTCGCTGCCGACCGTGGAGCGTT 2185361 Query 365055 TATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114 ||| ||| |||||| | ||| | | | | | || | | | | |||| || Sbjct 2185362 CATCGACCAGTCGCAGTCGCTCAACATCCACCTCGCGAACCCCTCGTTCTCGCAGCTCAC 2185421 Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTGCC 365160 || ||||| |||||||| ||||| |||||| ||||| |||||| Sbjct 2185422 CTCGATGCACTTCTACGGCTGGAAGCGCGGTCTCAAGACCGGTGCC 2185467 >seq1 Length=4840925 Score = 89.7 bits (98), Expect = 1e-12 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 22436 AGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCATTCGCGGAACGTC 22495 |||| ||||| || |||||| |||| | || | | |||| | ||| || ||| Sbjct 1301218 AGAAGAAGGCCGACTGGGCGATGAAGTACATCACCGATGATGTGCCCTTCCCGATACGCT 1301159 Query 22496 TTATTGCATTTGC-TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 | || || || || |||| | || ||||||||||| || || ||||| |||||||| Sbjct 1301158 TGATCGCGTTCGCCTGTG-TGGAGGGCATTTTCTTCTCGGGGTCATTTGCAGCAATCTTC 1301100 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 ||||| || || || | | ||| ||| | || || || || ||| | || |||||| Sbjct 1301099 TGGCTGAAGAAGCGCGGCCTCATGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGA 1301040 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA 22652 || |||||||| || ||||| || || || |||| || Sbjct 1301039 GACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTGTA 1301002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353065625024