Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9 140 3e-28 seq1 140 3e-28 seq2 129 6e-25 seq3 120 3e-22 >seq9 Length=896563 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | || | |||||||||||| || |||||||| ||| | Sbjct 20730 CCACCGCGCAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20671 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || |||||||| || |||| | |||||||||||| || ||| Sbjct 20670 AGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGG 20611 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | |||||||| Sbjct 20610 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 20551 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| ||||| || || || |||||||| Sbjct 20550 TCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCAT 20504 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| ||||||||||| || Sbjct 20958 CCACCACGCAGGCGGAGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAG 20899 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||||| || || Sbjct 20898 AGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 20839 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| ||||||| Sbjct 20838 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACC 20779 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || ||||| || ||||| || ||||| |||||||| Sbjct 20778 TCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 86.0 bits (94), Expect = 6e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| |||||| |||||||| || ||| | || | |||||||||||| |||||||| Sbjct 20391 GGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGGAT 20332 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 ||||| ||||| ||| ||| ||||| | || | || |||| ||||| | || Sbjct 20331 GCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTC 20272 Query 131190 GACGGTAACGGTTTTACCGGTTAGAGTTTT 131219 | ||| | ||| || ||||| || || || Sbjct 20271 AAGGGTGATGGTCTTGCCGGTGAGGGTCTT 20242 >seq1 Length=4840925 Score = 140 bits (154), Expect = 3e-28 Identities = 298/442 (67%), Gaps = 5/442 (1%) Strand=Plus/Minus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 |||| |||||| | | ||||| || || ||||| |||| || |||||| || Sbjct 902640 TTCGGCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTC 902581 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 || ||||||| | |||| | ||| ||||||||||||| ||||| |||||| Sbjct 902580 GCGTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAG 902521 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGC 46326 || || |||||||||||||||||||| || |||||||| || || || ||| | | Sbjct 902520 CTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCT---TCACGCAC 902464 Query 46327 GTGCACGACAAGCTTGC-GCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCAT 46385 | | | | || || |||||||| | | || |||||||||| || || Sbjct 902463 CTCCGCCGC-CGCCCGCACCCCGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGAT 902405 Query 46386 TGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTC 46445 ||| ||||||| | || | || || |||| | || | ||||||||||| || Sbjct 902404 CGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTGTCGCTCATCGGCATGAACGCCAAGCT 902345 Query 46446 AATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAA 46505 |||||| | |||||||||||||| |||||||| |||||||| ||| | | ||| Sbjct 902344 CATGTGCCAGTACATCGAGTTTGTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAA 902285 Query 46506 GCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAAC 46565 | | || || ||| || || || || ||| | | ||||| || ||||||| | Sbjct 902284 GGTCTGGAACTCGTCCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGC 902225 Query 46566 TAATTTTTTCGAAAAGCGCGTC 46587 || || ||||| ||||||| Sbjct 902224 CAACTTCTTCGAGTCGCGCGTC 902203 >seq2 Length=4481979 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||| ||| Sbjct 720209 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 720150 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 720149 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 720090 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | |||||||| Sbjct 720089 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 720030 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 |||| |||| ||| |||||||| || Sbjct 720029 TCGAGAGTAATGGTCTTACCGGTGAG 720004 >seq3 Length=3676950 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | |||||||||||| || |||||||| || Sbjct 1426926 CCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 1426985 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 1426986 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGG 1427045 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||||| Sbjct 1427046 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1427105 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 || | ||| | ||| || || || || Sbjct 1427106 TCAAGGGTGATGGTCTTGCCCGTCAG 1427131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012611194880