Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9 118 9e-22 seq2 111 1e-19 seq3 98.7 8e-16 >seq9 Length=896563 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || ||||||| || || || || | Sbjct 20504 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 20563 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| || || ||||| || Sbjct 20564 GACACGATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 20623 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| || | ||||| |||||| | ||||| |||||| Sbjct 20624 CAGCGTCTCATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACCCTGTCCGACTACAAC 20683 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | || | || | || ||||||| ||| Sbjct 20684 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGTCTGCGCGGTGGT 20731 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || ||||| ||| | || ||||| || || | || Sbjct 20732 ATGCAGATCTTCGTCAAGACTCTGACGGGTAAGACGATTACCCTTGAGGTCGAGTCTTCC 20791 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||||||||| || || || Sbjct 20792 GACACGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 20851 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || || || ||| | ||||| |||||| |||| || |||||| Sbjct 20852 CAGCGCCTTATCTTCGCGGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCGGACTACAAC 20911 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 20912 ATTCAGAAGGAGTCGAC 20928 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || ||||| ||| |||| || || || || | | Sbjct 20960 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 21019 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| || || ||||| || Sbjct 21020 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGACCAG 21079 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| || || |||| || |||||| Sbjct 21080 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGACGTACGCTCTCGGACTACAAC 21139 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 21140 ATCCAGAAGGAGTCTAC 21156 >seq2 Length=4481979 Score = 111 bits (122), Expect = 1e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 |||||||| || | ||||| || || || || | || ||| | ||| | |||| Sbjct 720007 ACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 720066 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 720067 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 720126 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| ||||||| |||||||| || || || || ||| Sbjct 720127 CAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACC 720180 >seq3 Length=3676950 Score = 98.7 bits (108), Expect = 8e-16 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || |||| ||| | ||| | |||| Sbjct 1427128 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 1427069 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || ||||| || || || ||||| Sbjct 1427068 AAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGCAAG 1427009 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| |||| || |||||||| || || || || ||| Sbjct 1427008 CAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACC 1426955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727836306080