Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 102 2e-16 seq1 102 2e-16 seq3 98.7 2e-15 >seq2 Length=4481979 Score = 102 bits (112), Expect = 2e-16 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || || || ||||| || ||||| || || ||||| | |||| ||||||||| | ||| Sbjct 1517962 GGCCCGAACGGTGCCGGAAAGTCGACGCTCATCAAGCTGATGACCGGCGAGACC-ATGCC 1518020 Query 280239 ACTG-AGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGC 280297 | | |||| ||||| ||||| ||| | || | | ||||||||| |||||||| Sbjct 1518021 TCAGGAGGGCTCCGTGCACAAGCACCCCGCTCTCCGTGTCGGTTACGTCGCCCAGCACGC 1518080 Query 280298 TTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 |||||||||||| | | ||||| |||| ||| || ||| ||||| |||||||| || Sbjct 1518081 CTTCCACCACATCAACGAACACCTCGACAAGACAGCTGTCCAGTACATCCAGTGGCGTTA 1518140 Score = 96.9 bits (106), Expect = 7e-15 Identities = 133/184 (72%), Gaps = 3/184 (2%) Strand=Plus/Plus Query 280177 TTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGG 280236 |||| ||||| || | || ||||| ||||| |||| |||| || ||||||||| || Sbjct 4067917 TTGGTCCCAACGGATCCGGAAAGTCGACCCTCGTCAAGCTCCTTACCGGCGAGACCGAGC 4067976 Query 280237 CCACTGAGGG--GT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 ||| | || || |||| |||||||| || ||| | || | |||||| || |||| Sbjct 4067977 CCAACGTCGGCGGTACCGTCTGGAAGCACCCTAACCTTGTCATCGGTTACGTTGCCCAGC 4068036 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 |||| ||||||||||| || | ||||| ||| ||| ||| | | ||||| | |||| Sbjct 4068037 ACGCCTTCCACCACATTGACCAGCACCTTGACTCGACCCCTCTCGAGTACATGCTCTGGC 4068096 Query 280354 GCTA 280357 | || Sbjct 4068097 GTTA 4068100 Score = 84.2 bits (92), Expect = 4e-11 Identities = 173/257 (67%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || || |||||||||||||||||||| | ||| |||| | || || | || Sbjct 1517485 TCGCTCTCTGGTGGTTGGAAGATGAAGCTTGAGCTCGCTCGTGGTATGCTCGTCAACCCC 1517544 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || |||| || || |||||||| ||||||||| ||||| | ||| || ||||| Sbjct 1517545 GACATCCTGCTCCTCGATGAGCCTACCAACCACTTGGACGTTCAGACCGTCGCTTGGCTC 1517604 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 | | ||| || | || || | | | | | | | || ||||| |||||||| || Sbjct 1517605 GAGGACTATCTCAACAACCTCACGGGCATCACCTGCATGATCGTCTCGCACGACTCCGGT 1517664 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAG 279941 ||||| || || || | | |||||| ||||| ||||| || |||||| | | Sbjct 1517665 TTCCTTGACAATGTCTGTACCGACATCATCCACTACGAGCAGAA---GAAGCTTGTCTAC 1517721 Query 279942 CACATCGGCAACCTGTC 279958 || ||||||||| || Sbjct 1517722 TACCCCGGCAACCTCTC 1517738 >seq1 Length=4840925 Score = 102 bits (112), Expect = 2e-16 Identities = 377/582 (65%), Gaps = 9/582 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| || ||||| | ||||||||||||||||||||| | Sbjct 902213 TCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGAC 902272 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | || | ||| | |||||| || |||| | ||||| || |||||||| | Sbjct 902273 GAGTTCCAGACCTTCTCGTTGCCAAGGGCGACGAGCAGACGGTCCGCGACAAACTCGATG 902332 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCACAGAT 251741 ||||| | ||| || | | ||||||||| || | ||||| || | ||||| || Sbjct 902333 TACTGGCACATGAGCTTGGCGTTCATGCCGATGA-GCGACACGGGGAGGGCCTCGGTGAG 902391 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAG-ACA 251800 ||| |||| ||| | || ||||||| | || || | | ||| | | | | Sbjct 902392 GAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATC-GTGTCGGGGTGCG 902450 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | | || | | | | || || | |||| | |||||| |||||||||| Sbjct 902451 GGCGGCGGCGGAGGTGCGTGAAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGC 902510 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||| |||||| || | ||||| ||||| | || || ||| ||||||||| Sbjct 902511 GCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGA 902570 Query 251921 AGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGG 251979 |||| | ||| || || |||||||| | | ||||||||| | | || | ||| Sbjct 902571 AGATGGACGC-GAACGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGATGAGG 902629 Query 251980 CGCTCAGCAAACGACTTGTCCTG---CGACAAGAACTTCTGTGCCCATGCTGCCTTCTTT 252036 ||||| | |||||| ||| ||| | | | ||||| | |||||||| Sbjct 902630 CGCTCGCCGAACGACGAACGCTGGTCCGAGATCCAGCGGAGAGCCCAGTCGGCCTTCTTC 902689 Query 252037 CCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCG 252096 | |||||| || ||||| || | || || | | ||| ||| | ||| | Sbjct 902690 TTGATGCAGGGGATGGTCTCGATGGCCTGGAACAGGTACTGCCGGCGGGCGTTGTCGCGG 902749 Query 252097 ATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 ||| || || | |||||| |||||| ||||||| |||||| Sbjct 902750 ATGTACGTGTCGATCAGGAGCGAGTACGTCTCCGAGTGGATG 902791 >seq3 Length=3676950 Score = 98.7 bits (108), Expect = 2e-15 Identities = 245/368 (67%), Gaps = 13/368 (4%) Strand=Plus/Minus Query 294151 AGGCCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTC 294210 ||||||||||||||| ||| | || | ||| | | | || | ||| || |||||| Sbjct 2184332 AGGCCAGGGCACTCGGCCGGGCACATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTC 2184273 Query 294211 ATGAATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCA 294270 ||||| || || || ||| | ||||| || | || ||||| || | ||||| Sbjct 2184272 ATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTT 2184213 Query 294271 CCTTGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATAC 294330 || || || ||||||| |||||||| | |||||||| || ||| || ||||| Sbjct 2184212 CCGTGGTTCTTACGGAGGTCGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAG 2184153 Query 294331 ACAGCAAAGG-ACCC-----CTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTG 294384 | ||| |||| |||| ||| || || ||||||| | |||| || || | | Sbjct 2184152 ATAGCGAAGGCACCCGGGCGCTTGTTG---CCACCCTGGTCGACGTAACGAGCAGTAGCG 2184096 Query 294385 TCAAACACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCT-- 294442 || | | ||||| || ||||| || | || | || ||||||||| ||| | Sbjct 2184095 TCGTAGGCACGGAGCATGGGGACGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGTAC 2184036 Query 294443 CAGCCCCGCGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGACA 294502 ||||| | | || |||| | ||||||||||| || |||||| || |||||| | Sbjct 2184035 GAGCCCTTGG--CACGGATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGA 2183978 Query 294503 ACTGGGCA 294510 ||||||| Sbjct 2183977 TCTGGGCA 2183970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836378586912