Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 524 1e-143 seq1 417 2e-111 >seq3 Length=3676950 Score = 524 bits (580), Expect = 1e-143 Identities = 1200/1787 (67%), Gaps = 67/1787 (4%) Strand=Plus/Minus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || |||||| ||||| |||||||| ||| | | || || || || | | ||| | Sbjct 2185389 GATGTTGAGCGACTGCGACTGGTCGATGAACGCTCCACGGTCGGCAGCGAGGTCGATAAC 2185330 Query 243934 GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCC 243993 ||||||| || ||||| | | ||||||||||||| ||||| || ||||||| Sbjct 2185329 CGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCTTGATGTCATCGGGGATGTT 2185270 Query 243994 TTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCA 244053 ||||| ||| | ||||| | |||||| || | ||| | |||| ||| Sbjct 2185269 GGGGATGTGCTGAATGGAGCCGCCGGAAGCGATGATGAGGTTCTTCATCTCCTCGTCCCA 2185210 Query 244054 CAGGCCCAAGC-GCTCCAG-CGC-CTCGA-CCAGGTGCCTGTTCACCACCTGAAACTCTC 244109 | ||| | | | || || ||| | || ||||| || | || ||| || || | Sbjct 2185209 GATGCCGAGGTTGATCAAGTCGCGCAGGAGCCAGGGGCAT----ACGACCGCGAAGTCAC 2185154 Query 244110 CCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGC 244169 | ||||| || |||||| ||| || | | || ||||||| || ||| | || Sbjct 2185153 CAGACAGGACACGGCGCGAGTAAAGCATCGAGGTGTAGGGCTCGAAGCACTCGTTCCAGC 2185094 Query 244170 CCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGC 244229 | || ||||||| ||| ||||| |||||||| | || || || ||| | || | Sbjct 2185093 CGAGGATCTGCGAGGTGGAGGCAGTGGGCATGGGAGCAACAAGGAGCGAGTTGCGGACAC 2185034 Query 244230 CGTGCCTCTGG---ATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCT 244286 ||||| ||| ||| | | |||||| |||||||||| |||||| Sbjct 2185033 CGTGC---TGGCCAATGTTGGCGCGGAGCTCAGTCCAGTCCCA---------GAGGTCGG 2184986 Query 244287 CGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG--CCCTC 244344 | | | | |||||| | ||| ||| | | |||| || ||| || | ||||| Sbjct 2184985 TGGGCTCAACGCCCCAGAGGTCGGGCTGGATCTTGCCCT-GC-GACATGGGCGAACCCTC 2184928 Query 244345 GTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTA 244404 || | ||||| ||| |||||||| || || | |||||||| |||| Sbjct 2184927 ATACGAGGGGTACTTGCCGAGCTTCTGGGCCATCTCGCACGAAGCCTCGAGGGCAGCGTG 2184868 Query 244405 GTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGAT 244464 ||||||||||||||||||| ||| | | ||| |||| | || |||||| || Sbjct 2184867 GTAGATGGTCTCGAAGATCTGGAGGTTGAGCTGGCGAGCCTCACGCGAGTCGAAGGGCAT 2184808 Query 244465 GCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCG 244524 || | ||||||| |||||| || ||||| || |||| |||| ||| | ||| || Sbjct 2184807 GCGGAGGGCCATGAAGGTGTCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCG 2184748 Query 244525 CTTGTTGGAG---CGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTT 244581 | |||| ||| ||| || ||||| |||||||| |||||| ||| |||| || Sbjct 2184747 CATGTTCGAGTTGCGC---GCCTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTC 2184691 Query 244582 GAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGG 244641 ||||||||||||| | | || ||| |||| || |||||||| | || Sbjct 2184690 AAGGTTGCGGGTGACGACCTTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGGTCTTGGT 2184631 Query 244642 ATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGAC 244701 || || | ||| | || | |||||||| ||| |||||||| || Sbjct 2184630 CTC------GAAGTTGA------CGAAGGCAGGGAGGGCGATCGAGGCAAGGTTGCACAC 2184583 Query 244702 GGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGAT 244761 ||| ||||| || | | ||||| | ||||| ||||||||||| ||||||| Sbjct 2184582 GGCAACCTCATCGGGAGACGAGTACTCAATGATCTCAGTGCAGAGGTTGGACGACTTGAT 2184523 Query 244762 GGTGCCCAGGTGCTGGTGATTGGACTTGGCGTT-GCAGGCGTCCTTGTAGAGCATGAAGG 244820 |||||| |||||||| || ||||||||| ||| |||| ||||||||||||||||||||| Sbjct 2184522 GGTGCCGAGGTGCTGCTGGTTGGACTTGCGGTTCGCAG-CGTCCTTGTAGAGCATGAAGG 2184464 Query 244821 GCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCG 244880 | || ||||||||| ||| || | |||| | | |||||| | | |||||||| | Sbjct 2184463 GACCACCGGTCTCGGTCTGAGCCTCAAGGATGGCGAACCAGAGCTTCTGAGCCTTGATAG 2184404 Query 244881 TCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCC 244940 || ||||| ||||||| | |||||||| |||||| ||||||||| Sbjct 2184403 TCTTGCGACCCTTGCCGGCACGCTCGTAGCTCTCGTACAGCTTCTCGAACTCCTCAGAGT 2184344 Query 244941 AGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCT 245000 ||| ||| | ||||| |||||| |||||||||||||| |||| |||||| || || Sbjct 2184343 GGACGTCGGCGAGGCCAGGGCACTCGGCCGGGCACATGAGGGTCCAGTCGCCGTCGGACT 2184284 Query 245001 TGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT 245060 ||| | || |||||||||||||| |||||||||||| | ||||||||| | || | Sbjct 2184283 CGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAA 2184224 Query 245061 GCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGG 245120 ||| ||| || |||||| | || || | ||||| |||| |||| ||||||||| Sbjct 2184223 CCTCCTCCTTTCCGTGGTTCTTACGGAGGTCGAGGAAGTCGAAGATGTCGGCGTGCCAGG 2184164 Query 245121 GCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCT 245180 |||| | |||| ||||| ||| || || ||||||||||| |||||||| | | | Sbjct 2184163 GCTCAAGATAGATAGCGAAGGCACCCGGGCGCTTGTTGCCACCCTGGTCGA----CGTAA 2184108 Query 245181 CGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTG 245236 ||||| |||| | || || || | || || || ||||| |||| ||||||||| Sbjct 2184107 CGAGCAGTAGCGTCGTAGGCACGGAGCATGGGGACGATACCGTTCGAGTAGCCGTTGGTT 2184048 Query 245237 CCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCG 245296 || ||||| | ||||||| | | || |||| |||| | || | || ||||| Sbjct 2184047 CCGGCAATGTACGAGCCCTTGGCACGGATGTTGTGGATGTGGAGACCGATACCACCGGCA 2183988 Query 245297 TGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGAC 245356 ||||||||| |||| ||| |||||| ||||| ||||| || || |||| | Sbjct 2183987 GTCTTGGAGATCTGGGCACAGGTCTTGAGAGTGTCGTAGATGCCGTCGATCGAGTCCTCC 2183928 Query 245357 TTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGA 245416 |||||| || || ||||| || |||| ||||| | ||| | | ||||||||| ||| Sbjct 2183927 TTCATGGCGACAAGGAAGCAAGACGACATCTGGGCGTGGGGAGTACCCGAGTTGAAGAGA 2183868 Query 245417 GTGGGGCTGGCGTGGGTAAAGTAGCG---GCTCGAGAGGAACCCGTACGTCTGGAGCAGA 245473 ||||| ||||||||| |||||||| |||| ||| ||| |||| | | Sbjct 2183867 GTGGGCGAGGCGTGGGTGAAGTAGCGCTCGCTCATAAGG---TTGTAGGTCTCAATGACC 2183811 Query 245474 GCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT-GGGGCG- 245531 || |||| ||| |||||||| | || | | |||||| |||||| |||||| Sbjct 2183810 TTCTCAATGTCGTCACCGTGGATACCAACGGAGACACGCATGAGCATGTGCTGGGGGCGC 2183751 Query 245532 TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCA 245590 || |||| || ||| | ||| | |||||||||||||||||||||||| || Sbjct 2183750 TCAGCGATCTTGCCGTCGATGC---GGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCG 2183694 Query 245591 AAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 ||||| |||| |||||||| || || ||| || ||||| || Sbjct 2183693 AAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATGATCGCGGCGTCAAG 2183647 >seq1 Length=4840925 Score = 417 bits (462), Expect = 2e-111 Identities = 614/856 (72%), Gaps = 26/856 (3%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||||||| || |||||||||||||||||| |||| Sbjct 903036 ATCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTC 902977 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 ||| ||| || |||||| |||| || ||||| | ||| || | Sbjct 902976 GCCCCCGACCTCCACGACTGGGACAACAAACTGAACGACAACGAGCGCTACTTCATCGAG 902917 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || || ||||||||||| || ||||| || ||||| |||||||| | | | Sbjct 902916 CACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGAGCGC 902857 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 ||| ||||| ||| || ||||| ||||||||||||||||| || Sbjct 902856 TTCTGCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGATG 902797 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGAT----CC 42592 |||||| | ||||| ||| |||| | ||| || |||||||||||| || || Sbjct 902796 GAGAACATCCACTCGGAGACGTACTCGCTCCTGATCGACACGTACATCCGCGACAACGCC 902737 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 || || ||| | ||||| ||||||| ||||| || |||||||||||||||||||| Sbjct 902736 CGCCGGCAGTACC----TGTTCCAGGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGC 902681 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTA 42710 |||||||| ||| ||||||| | | || | || | ||||||||||| | || | Sbjct 902680 CGACTGGGCTCTCCGCTGGATCTCG-GACCAG-CGTTCGTCGTTCGGCGAGCGCCTCATC 902623 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 ||||| ||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||| Sbjct 902622 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCCATCTTCTGGCTC 902563 Query 42771 AAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || || || |||||||| ||||| ||||||||||| |||||| | ||||| Sbjct 902562 AAGAAGCGCGGCCTC-ATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGA 902504 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC-CCT 42888 ||| ||||| | |||||||||||||| || ||| || || || | | | | || || Sbjct 902503 GGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTCCGCCGCCGCCCGCACCC 902444 Query 42889 CGA-AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTC 42947 ||| | || || ||||||| ||||||||| |||||||| ||||||||||| Sbjct 902443 CGACACGA-----TCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTC 902389 Query 42948 ACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATC 43007 || || | || |||||||| || ||||||||||| | | ||||||||| |||||||| Sbjct 902388 ACCGAGGCCCTCCCCGTGTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATC 902329 Query 43008 CAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCC 43066 ||| ||||| |||| ||| || || | ||| || | ||| ||| || | Sbjct 902328 GAGTTTGTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAAG-GTCTGGAACTCGTC 902270 Query 43067 GTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAA 43126 |||||||||||| ||||||| |||||| | |||||||| ||||||| |||||| Sbjct 902269 CAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTC 902210 Query 43127 GCGCGTCGCCGACTAC 43142 ||||||| | | |||| Sbjct 902209 GCGCGTCTCGGCCTAC 902194 Score = 178 bits (196), Expect = 2e-39 Identities = 246/338 (73%), Gaps = 10/338 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||||| ||||||| || ||||||||| |||||||||| ||||||||| | || Sbjct 1301252 CTGTTCAAGGGAATGGAGAACATTCCCTGCATCCAGAAGAAGGCCGACTGGGCGATGAAG 1301193 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGG-TAGCCTTTACCGCCGTCGA 42727 | ||| | || | | ||| ||| | ||| | | || || || || || Sbjct 1301192 TACATCACCGAT---GATGTGCCCTTCC-CGATACGCTTGATCGCGTTCGCCTGTGTGGA 1301137 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGA 42786 |||||| ||||||||||| | || || | ||||||||||| ||| || || || | Sbjct 1301136 GGGCATTTTCTTCTCGGGGTCATTTGCAGCAATCTTCTGGCTGAAGAAGCGCGGCCTC-A 1301078 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 || || | |||||||||||||| || |||||| | |||||||| ||||| | |||| Sbjct 1301077 TGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGAGACGAGGGTCTGCACACCGACT 1301018 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGG 42906 | |||||||| |||| | |||||||||| ||||||| |||| ||||| ||||| Sbjct 1301017 TCGCCTGCCTGCTGTAC---AGCCACCTCAAGCACAAGTGCTCGCAGGAGGAGGTCCACA 1300961 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 ||| ||| |||| | |||| ||||||||||||||| Sbjct 1300960 AGATCGTCAAGGAGTCGCTGGAAATCGAGAAGGAGTTC 1300923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338822264320