Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 100 6e-16 seq4 95.1 3e-14 >seq1 Length=4840925 Score = 100 bits (110), Expect = 6e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 243486 CGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGA 243545 ||| ||| |||| | ||||||| || || || | | ||| |||| ||| | ||| Sbjct 902443 CGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTCACCGA 902384 Query 243546 CGCTATTCCA-TGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAAT 243604 || | || || || || || ||||||||| | | |||||| | ||||||||||| | Sbjct 902383 GGCCCTCCCCGTGTCG-CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGT 902325 Query 243605 TCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACC 243664 | || || ||||| | || |||| ||||| | ||||| || | ||||| |||| Sbjct 902324 TTGTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAAGGTCTGGAACTCGTCCAACC 902265 Query 243665 CCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 |||| | ||| |||||| | || ||||| || || || | ||||||||||| Sbjct 902264 CCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 902213 >seq4 Length=2479610 Score = 95.1 bits (104), Expect = 3e-14 Identities = 238/357 (67%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 297434 TTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAAC 297493 || |||||||| || || ||||| || |||||||||||||||||| | || ||||||| Sbjct 1257817 TTGGTGAAAATGTAACGAGCACTGGCAGCATCCTTACCACCCTGCAAACGCGTACCGAAC 1257876 Query 297494 TGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTC 297553 || || | ||| || ||||||||| ||||| |||| | | ||| |||||| Sbjct 1257877 TGACCGTTGGGCGCCAGGAGGTTGATGTTGTTGCTGCCGATGAAGTTCTGGGCAAGGCCA 1257936 Query 297554 ACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 || || ||| | |||||| | || || ||||| ||||| | | ||| |||||| Sbjct 1257937 ACAATTGTCGAGTACAGAGACGTCTCACCGTGGTGGTAGGCCGTGTTCTCCATCACGTAA 1257996 Query 297614 CCGCTGAACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAA--AGCTGAATAT 297670 || || ||| ||| ||||| | | | | | | || |||||| ||| || | Sbjct 1257997 CCAACGACCTGCTGC-ACCTTGATCTGGTTTTTGATCTTCTTCTTGAAGCAGCCGA--AA 1258053 Query 297671 ATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGA 297730 || || || || ||| ||| || | || || ||||||| || ||| || Sbjct 1258054 ATGACCTTGCGCTGACCAGGCTTCAGGCCGTCGGCGACCGAAGGGATGGAACGGATGTTG 1258113 Query 297731 TCGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCG 297787 ||| | ||||| | ||| || ||||||| || |||||| | | ||| | |||| Sbjct 1258114 TCGGCCATGGAGAAGAGAATGAGCTCCTTGTTGACGAAGTCAGAGATGGGGATCTCG 1258170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879547819200