Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 201 1e-46 seq1 120 4e-22 >seq3 Length=3676950 Score = 201 bits (222), Expect = 1e-46 Identities = 1099/1738 (63%), Gaps = 31/1738 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 ||||||||||| || |||||||| || |||||||| | || | |||||||||| Sbjct 2185478 CGGAGGTAGTAGGCACCGGTCTTGAGACCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTG 2185419 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | || |||| | || | | | | || ||| | || || || |||||||| Sbjct 2185418 AGCTGCGAGAACGAGGGGTTCGCGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAAC 2185359 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776 |||||| || || || | || || || ||||| | ||| ||||| ||||| || Sbjct 2185358 GCTCCACGGTCGGCAGCGAGGTCGATAACCGCCTTCTGCGAGATCTCCCAGACAGTCTTG 2185299 Query 113777 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTG 113836 |||| | ||| || ||||| ||||| | ||| | || |||||||| || | | Sbjct 2185298 TAGATGGCCTTGATGTCATCGGGGATGTTGGGGATGTGCTGAATGGAGCCGCCGGAAGCG 2185239 Query 113837 ACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG- 113895 | ||||| | |||||| |||| ||||| || | || | | || || ||| Sbjct 2185238 ATGATGAGGTTCTTCATCTCCTCGTCCCAGATGCCGAGGTTGATCAAGTCGCGCAGGAGC 2185179 Query 113896 -ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954 | | || || || | || ||||| | ||| || | | || | | | | Sbjct 2185178 CAGGGGCAT--ACGACCGCGAAGTCACCAGACAGGACACGGCGCGAGTAAAGCATCGAGG 2185121 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 |||| ||||| |||||||| || || | ||| || | ||||||||| |||||||||| Sbjct 2185120 TGTAGGGCTCGAAGCACTCGTTCCAGCCGAGGATCTGCGAGGTGGAGGCAGTGGGCATGG 2185061 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 | || | || || ||| |||| ||| | | | |||| | ||| | || Sbjct 2185060 GAGCAACAAGGAGCGAGTTGCGGACACCGTGCTGGCCAATGTTGGCGCGGAGCTCAGTCC 2185001 Query 114075 AGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 |||| || | | | ||| | ||| | || ||||| | || || || Sbjct 2185000 AGTCCCAGAGGTCGGTGGGCTCAACGCCCCAGAGGTCGGGCTGGATCTTGCCCTGCGACA 2184941 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 114194 ||||| |||||| | | ||| ||| || |||| ||| | |||| Sbjct 2184940 TGGGCGAACCCTCATACGAGGGGTACTTGCCGAGCTTCTGGGCCATCTCGCACGAAGCCT 2184881 Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCG 114253 ||||||| ||||| || || ||||| || || | || | || | | |||| Sbjct 2184880 CGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAGCTGGCGAG-CCTCACGC 2184822 Query 114254 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313 || || || | | ||| || || || |||||||| ||||||||||| || Sbjct 2184821 GAGTCGAAGGGCATGCGGAGGGCCATGAAGGTGTCGGCGAGACCCTGGACACCGAGACCG 2184762 Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTA 114370 | ||||| || | ||| || || || || || ||| ||||| || | || | | Sbjct 2184761 ACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC---CTCGGGGACGGGGTAGTAGTTGCGA 2184705 Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430 ||| ||| | || || |||||| ||||| ||||| || || ||||| | | | Sbjct 2184704 GTGATGACCTGGTCAAGGTTGCGGGTGACGACCTTGGTGATCTCGTGCAGCTTCTTGAAG 2184645 Query 114431 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 114490 || | | ||||| ||||| | ||| |||||||| || || || || ||| Sbjct 2184644 TCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCAGGGAGGGCGATCGAGGCAAGGTTGCAC 2184585 Query 114491 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 114550 || | |||||| | | |||||| || || || || || | || || ||| Sbjct 2184584 ACGGCAACCTCATCGGGAGACGAGTACTCAATGATCTCAGTGCAGAGGTTGGACGACTTG 2184525 Query 114551 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 114610 |||||||| | || || || || ||||| ||| || |||||||| |||||| | Sbjct 2184524 ATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGGTTCGCAGCGTCCTTGTAGAGCATGAAG 2184465 Query 114611 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCAC 114669 || || ||||| || || | || || || || ||||| | || | | || | | Sbjct 2184464 GGACCACCGGTCTCGGTCTGAGCCTCAAGGATGGCGAACCAGAGCTTCTGAGCCTTG-AT 2184406 Query 114670 AGTGGCGTTGGCTCGCCCCTCCTC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCAC 114728 ||| | | | | || | | |||||| | ||| || || ||||| ||| Sbjct 2184405 AGTCTTGC-GACCCTTGCCGGCACGCTCGTAGCTCTCGTACAGCTTCTCGAACTCCTCAG 2184347 Query 114729 CCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCT 114788 | | || | ||| || || || | ||||| | ||| | ||| | || | Sbjct 2184346 AGTGGACGTCGGCGAGGCCAGGGCACTCGGCCGGGCACATGAGGGTCCAGTCGCCGTCGG 2184287 Query 114789 CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGC 114848 ||| |||||||||||||||||||| | ||||||||| || ||||||| || || | Sbjct 2184286 ACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCAC 2184227 Query 114849 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 114908 || | || || | || || || ||| | || | ||||| | ||| || ||||||| Sbjct 2184226 GAACCTCCTCCTTTCCGTGGTTCTTACGGAGGTCGAGGAAGTCGAAGATGTCGGCGTGCC 2184167 Query 114909 ACGGTTCCAGGTACACCGCGATTG-ACCC-----CTTACGACGACCAGCCTGGTTTACAT 114962 | || || || || | |||| | |||| ||| | | ||| |||||| || | Sbjct 2184166 AGGGCTCAAGATAGATAGCGAAGGCACCCGGGCGCTT--GTTG-CCACCCTGGTCGACGT 2184110 Query 114963 ACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG 115022 | | || || || | | | || ||||| || | |||||| | || | ||| || | Sbjct 2184109 AACGAGCAGTAGCGTCGTAGGCACGGAGCATGGGGACGATACCGTTCGAGTAGCCGTTGG 2184050 Query 115023 TCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCC 115080 | || ||| ||||| | | |||| | || | |||||||| | ||| ||||| || Sbjct 2184049 TTCCGGCAATGTACGAGCCCT--TGGCACGGATGTTGTGGATGTGGAGACCGATACCACC 2183992 Query 115081 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTC 115140 || ||| ||||| || || || | ||||| || ||||||| |||||||||||||| Sbjct 2183991 GGCAGTCTTGGAGATCTGGGCACAGGTCTTGAGAGTGTCGTAGATGCCGTCGATCGAGTC 2183932 Query 115141 ACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGA 115199 |||| | |||| ||||||||| |||||| || ||| | || ||||| | ||||| Sbjct 2183931 CTCCTTCATGGCGACAAGGAAGCAAGACGACATCTG-GGCGTGGGGAGTACCCGAGTTGA 2183873 Query 115200 AGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGA 115259 |||| || || | |||||| |||| | | | ||| | ||||||||| | || Sbjct 2183872 AGAGAGTGGGCGAGGCGTGGGTGAAGTAGCGCTCGCTCATAAGGTTGTAGGTCTCAATGA 2183813 Query 115260 CGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 | |||||| || ||||| ||||| | ||||| ||||| | ||||| ||||| Sbjct 2183812 CCTTCTCAATGTCGTCACCGTGGATACCAACGGAGACACGCATGAGCATGTGCTGGGG 2183755 >seq1 Length=4840925 Score = 120 bits (132), Expect = 4e-22 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| ||| ||| || || ||||||||| || ||| |||||| || Sbjct 1301025 GTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAGAAGGTCAAACCTCCCATGAGGCC 1301084 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| || || |||||| ||||||||||| || ||||||||||| Sbjct 1301085 GCGCTTCTTCAGCCAGAAGATTGCTGCAAATGACCCCGAGAAGAAAATGCCCTCCACACA 1301144 Query 126178 CGCGAACGC 126186 |||||||| Sbjct 1301145 GGCGAACGC 1301153 Score = 107 bits (118), Expect = 2e-18 Identities = 297/453 (66%), Gaps = 12/453 (3%) Strand=Plus/Plus Query 125752 CTTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATT 125811 |||| |||| || || ||| |||||||||||| | ||| || | | ||| | Sbjct 902188 CTTGGAGTAGGCCGAGACGCGCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCAT 902247 Query 125812 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGT 125866 |||||| || || || ||||| |||||||| | | |||| |||| Sbjct 902248 CTCCATGAAGTCGAAGGGGTTGGACGAGTTCCAGACCTTCTCGTTG-----CCAAGGGCG 902302 Query 125867 TTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCG 125926 ||| ||||| |||| ||| |||| ||||||| |||| || | |||||| ||| Sbjct 902303 ACGAGCAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCG 902362 Query 125927 ATGAGGTTACATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCG 125985 ||||| ||| ||| || || || || |||| ||| ||| || | ||||| ||| Sbjct 902363 ATGAGCG-ACACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCCTCCTT 902421 Query 125986 CACGATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC 126045 | ||| || || ||||| || | ||| | | ||||||| Sbjct 902422 GATGATCTTGTTGATCGTGTCGGGGTGCGGGCGGCGGCGGAGGTGCGTGAAGAGCAGGCA 902481 Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || |||||||| || |||||||| || |||||||| || || Sbjct 902482 GGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCC 902541 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| || |||||||| | |||||| || | || || || ||||||||||| Sbjct 902542 GGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGAT 902601 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTC 126198 ||||| || ||||| || | ||| ||||| Sbjct 902602 ACCCTCGACGGCGGCGAAGGCGATGAGGCGCTC 902634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353361058560