Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq9 114 1e-20 seq3 91.5 2e-13 seq2 82.4 8e-11 >seq9 Length=896563 Score = 114 bits (126), Expect = 1e-20 Identities = 145/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||| || || |||| || || ||||| || || || Sbjct 20695 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAA 20636 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||||| || | || |||||||||| ||| | || | |||| || Sbjct 20635 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CG 20578 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | |||||| || || || |||| |||||||| ||||| || || ||||| Sbjct 20577 TTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTG 20518 Query 42195 ACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 20517 ACAAAGATCTGCAT 20504 Score = 102 bits (112), Expect = 9e-17 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || | || || |||||||| ||||| || Sbjct 21151 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTCGAGCTGCTTTCCAGCAAA 21092 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||||| || | | |||||||||| ||| | || | |||| || Sbjct 21091 GATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC-TGAATCTTGGACTTGA-CG 21034 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | ||||| ||| || || || | |||||| || || ||||| || ||||| Sbjct 21033 TTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTC 20974 Query 42195 ACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 20973 ACAAAGATCTGCAT 20960 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | || || || |||| || ||||||||||| ||||| Sbjct 20923 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAA 20864 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 20863 GATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 20805 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||||| || || || || | || || || || ||||| || ||||| | Sbjct 20804 TGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGA 20745 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 20744 CGAAGATCTGCAT 20732 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090 |||| |||| || || || |||| || |||||||| || ||||| ||||| ||||||| Sbjct 20404 TGTAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCT 20345 Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 42149 |||||| || | || ||||||||| ||| || |||| ||| | | | |||||| Sbjct 20344 GGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCG 20286 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 ||| || || || | |||||||| ||||| || || ||||| Sbjct 20285 GACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 20242 >seq3 Length=3676950 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| |||||||| Sbjct 1426961 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1427020 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 1427021 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1427079 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 | | | |||||| || || || || | |||||||| |||||||| || Sbjct 1427080 TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAG 1427131 >seq2 Length=4481979 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 720174 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 720115 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||||| ||||||||||||| || | || |||||||||| ||| || Sbjct 720114 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 720067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212582714880