Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 188 9e-43 seq1 120 4e-22 >seq3 Length=3676950 Score = 188 bits (208), Expect = 9e-43 Identities = 674/1042 (65%), Gaps = 19/1042 (2%) Strand=Plus/Minus Query 116248 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 116307 || |||||||| ||||||||||| || | ||||| || | ||| || || || || || Sbjct 2184788 TCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 2184730 Query 116308 GTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 116364 ||| ||||| || | || | | ||| ||| | || || |||||| ||| Sbjct 2184729 --CTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACGACC 2184672 Query 116365 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 116424 || ||||| || || ||||| | | | || | | ||||| ||||| | | Sbjct 2184671 TTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCA 2184612 Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || |||||||| || || || || ||||| | |||||| | | |||||| || Sbjct 2184611 GGGAGGGCGATCGAGGCAAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATG 2184552 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | || || ||| |||||||| | || || || || ||||| | Sbjct 2184551 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 2184492 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || |||||||||||||| | || || ||||| || || | || || || Sbjct 2184491 TTCGCAGCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATG 2184432 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC-CTCGTACT 116662 || ||| | | || | | || | | ||| | | | | || | | |||||| Sbjct 2184431 GCGAACCAGAGCTTCTGAGCCTTG-ATAGTCTTGC-GACCCTTGCCGGCACGCTCGTAGC 2184374 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTG 116722 | ||| || ||| ||||| ||| | || | ||| || || || | | Sbjct 2184373 TCTCGTACAGCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTCGGCCG 2184314 Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 116782 | || | ||| | ||| | || | ||| || ||||||||||||||||| | ||||| Sbjct 2184313 GGCACATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGAGATCC 2184254 Query 116783 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 116842 |||| || ||||||| || || ||| | || || | || || || ||| | | Sbjct 2184253 AGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACGGAGGT 2184194 Query 116843 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGC 116902 | | ||||| | ||| || |||||||| || || || || | |||| | ||| || Sbjct 2184193 CGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACCCGGGC 2184134 Query 116903 GACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | ||| |||||| || || | || || |||| | | || ||||| || | Sbjct 2184133 GCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATGGGGA 2184074 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATC 117017 |||||| | || | ||| || || || ||| ||||| | | |||| | || | Sbjct 2184073 CGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCT--TGGCACGGATGTT 2184016 Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 ||||||||| | ||| ||||| || || ||| ||||| || || || | ||||| | Sbjct 2184015 GTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTCTTGAGAGT 2183956 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 | ||||||| || ||||||||||| |||| | |||| |||||||| |||||| || Sbjct 2183955 GTCGTAGATGCCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGACGACATCTG 2183896 Query 117138 TGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGG 117196 ||| | || ||||| | ||||||||| || || | |||||| |||| | | | Sbjct 2183895 -GGCGTGGGGAGTACCCGAGTTGAAGAGAGTGGGCGAGGCGTGGGTGAAGTAGCGCTCGC 2183837 Query 117197 ACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGA 117256 ||| | ||||||||| | ||| |||||| || ||||| ||||| | |||| Sbjct 2183836 TCATAAGGTTGTAGGTCTCAATGACCTTCTCAATGTCGTCACCGTGGATACCAACGGAGA 2183777 Query 117257 CCCGCATAAACATGTATTGGGG 117278 | ||||| | ||||| ||||| Sbjct 2183776 CACGCATGAGCATGTGCTGGGG 2183755 >seq1 Length=4840925 Score = 120 bits (132), Expect = 4e-22 Identities = 309/465 (66%), Gaps = 18/465 (4%) Strand=Plus/Plus Query 127225 CTTGCCGTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT 127284 |||| |||| || ||| ||| |||||||||||| | ||| || | ||| ||| | Sbjct 902188 CTTGGAGTAGGCCGAGACGCGCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCAT 902247 Query 127285 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGT 127339 |||||| || || || ||||| |||||||| | | |||| |||| Sbjct 902248 CTCCATGAAGTCGAAGGGGTTGGACGAGTTCCAGACCTTCTCGTTG-----CCAAGGGCG 902302 Query 127340 TTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCG 127399 ||| ||||| |||| ||| |||| ||||||| |||| || | |||||| ||| Sbjct 902303 ACGAGCAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCG 902362 Query 127400 ATGAGGTTACATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCG 127458 ||||| ||| ||| || || || || |||| ||| ||| || | || || ||| Sbjct 902363 ATGAGCG-ACACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCCTCCTT 902421 Query 127459 TACGATGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA- 127517 | ||| || || ||||| || | ||| | | ||||||| || Sbjct 902422 GATGATCTTGTTGATCGTGTCGGGGTGCGGGCGGCGGCGGAGGTGCGTGAAGAG---CAG 902478 Query 127518 -CAG-CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 127575 ||| |||| || ||| || |||||||| || |||||||| || |||||||| || Sbjct 902479 GCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAG 902538 Query 127576 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 127635 || |||||||| || |||||||| | |||||| || | || |||||||||||||| Sbjct 902539 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAA 902598 Query 127636 GATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 ||| ||||| || ||||| || | || |||||| | || || Sbjct 902599 GATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGA 902643 Score = 120 bits (132), Expect = 4e-22 Identities = 104/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||||||||| ||| ||| || || ||||||||| || |||| |||||| || Sbjct 1301025 GTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAGAAGGTCAAACCTCCCATGAGGCC 1301084 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| || || |||||| || |||||||| || ||||||||||| Sbjct 1301085 GCGCTTCTTCAGCCAGAAGATTGCTGCAAATGACCCCGAGAAGAAAATGCCCTCCACACA 1301144 Query 127651 CGCGAACGC 127659 |||||||| Sbjct 1301145 GGCGAACGC 1301153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506954597120