Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 149 1e-30 >seq3 Length=3676950 Score = 149 bits (164), Expect = 1e-30 Identities = 354/530 (67%), Gaps = 4/530 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| || |||||| |||||| ||| |||| || || |||||||| | || | || Sbjct 2184276 CTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTC 2184217 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | ||| ||||||| | ||| || ||| || | |||||||||||||| ||||| | Sbjct 2184216 CTTTCCGTGGTTCTTACGGAGGTCGAGG-AAGTCGAAGATGTCGGCGTGCCAGGGCTCAA 2184158 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||||||||| || |||| | | Sbjct 2184157 GATAGATAGCGAAGGCACCCGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAG 2184098 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 ||| | | | || ||||| || || | |||||| | | ||||| || | | ||| Sbjct 2184097 CGTCGTAGGCACGGAGCATGGGGACGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGT 2184038 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 |||||| | || | | |||| |||| || || || || | | ||||| || Sbjct 2184037 ACGAGCCCTTGGCACGGATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGA 2183978 Query 205464 TCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 ||||||| || ||||| |||||| ||||||||| |||| || || ||| || | Sbjct 2183977 TCTGGGCACAGGTCTTG-AGAGTGTCGTAGATGCCGTCGATCGAGTCCTCCTTCATGGCG 2183919 Query 205523 ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582 || || |||| || | || || ||| | || |||| || |||||| ||||| | Sbjct 2183918 ACAAGGAAGCAAGACGACATCTGGGCGTGGGGAGTACCCGAGTTGAAGAGAGTGGGCGAG 2183859 Query 205583 GCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCG 205642 |||||| ||||| |||||||| | |||||||||| | || |||| | ||| Sbjct 2183858 GCGTGGGTGAAGTAGCGCTCGCTCATAAGGTTGTAGGTCTCAATGACCTTCTCAATGTCG 2183799 Query 205643 AAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692 ||||| ||||| | || || | ||||| | ||| || || | ||| Sbjct 2183798 TCACCGTGGATACCAACGGAGACACGCATGAGCATGTGCTGGGGGCGCTC 2183749 Score = 127 bits (140), Expect = 3e-24 Identities = 331/499 (66%), Gaps = 7/499 (1%) Strand=Plus/Minus Query 203836 CGTCTTG---TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 ||||||| || | ||||||||| |||||||| | ||||| | | | | || ||||| Sbjct 2185527 CGTCTTGGCGTCGATCGTGAACTGGATGGCGTTGGCAGCAGGACGGGTGCGGAGGTAGTA 2185468 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTT-GCTCA 203951 |||||||| || || || ||| ||||| | |||||| || | || | | | Sbjct 2185467 GGCACCGGTCTTGAGACCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAA 2185408 Query 203952 CGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGAT 204011 || ||| ||| | | ||| ||||| || ||||| ||||||||||| | | || | Sbjct 2185407 CGAGGGGTTCG-CGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAACGCTCCACGGT 2185349 Query 204012 CTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTC 204071 | || || | | ||||| | ||||||||| |||||||| || |||||| | | | | Sbjct 2185348 CGGCAGCGAGGTCGATAACCGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCT 2185289 Query 204072 TGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTC 204130 || ||| | || | | | | || ||| || |||||| | || || | Sbjct 2185288 TGATGTCATCGGGGATGT-TGGGGATGTGCTGAATGGAGCCGCCGGAAGCGATGATGAGG 2185230 Query 204131 ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 || || ||||||| |||| ||||| | |||||| || |||| || |||| Sbjct 2185229 TTCTTCATCTCCTCGTCCCAGATGCCGAGGTTGATCAAGTCGCGCAGGAGCCAGGGGCAT 2185170 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | || | ||||| || ||||| || | || | | | || | |||| | || ||| Sbjct 2185169 ACGACCGCGAAGTCACCAGACAGGACACGGCGCGAGTAAAGCATCGAGGTGTAGGGCTCG 2185110 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 || |||||| ||||| ||||| | |||| ||| |||||||||||||| | || Sbjct 2185109 AAGCACTCGTTCCAGCCGAGGATCTGCGAGGTGGAGGCAGTGGGCATGGGAGCAACAAGG 2185050 Query 204311 AGGGAGTTGCGCACACCGT 204329 || |||||||| ||||||| Sbjct 2185049 AGCGAGTTGCGGACACCGT 2185031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154881937920