Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq9 161 2e-34 seq2 129 1e-24 seq3 127 5e-24 >seq9 Length=896563 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||||| |||| ||||||||| | | || | |||||| Sbjct 21171 AGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCC 21112 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| || ||||||||||| ||| ||||| || ||| Sbjct 21111 TCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 21052 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || |||| |||||||||| Sbjct 21051 TGAATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTC 20992 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || |||||||| || || Sbjct 20991 TTACCCGTGAGGGTCTTCACAAAGATCTG 20963 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | || || | || || Sbjct 20715 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCC 20656 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||| |||||||||||||||||||| || || || || ||| Sbjct 20655 TCGAGTTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 20596 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 20595 TGAATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTC 20536 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || ||||| || || Sbjct 20535 TTGCCGGTAAGAGTCTTGACAAAGATCTG 20507 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| |||||||||||||| || | ||||||||| | | || | || || Sbjct 20943 AGCACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTCC 20884 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| || ||||||||||| || ||| || || ||| Sbjct 20883 TCAAGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCC 20824 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | || |||||| Sbjct 20823 TGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGTC 20764 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| ||||| || || || || || Sbjct 20763 TTACCCGTCAGAGTCTTGACGAAGATCTG 20735 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||||| | || | || || || ||||||||||| ||||| ||||||||||||| Sbjct 20404 TGTAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCT 20345 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 |||| ||| || ||||| ||||| ||||| ||| ||| |||| |||||| | Sbjct 20344 GGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGG 20285 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTT 199614 | || || || | ||||| ||||| || ||||| || || Sbjct 20284 ACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 20242 >seq2 Length=4481979 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 720194 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 720135 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || ||| || || ||| Sbjct 720134 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 720075 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | || || ||| Sbjct 720074 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTC 720015 Query 199598 TTACCCGTGAG 199608 ||||| ||||| Sbjct 720014 TTACCGGTGAG 720004 >seq3 Length=3676950 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||||||||| ||||||||||| |||| ||||||||| | | || Sbjct 1426932 CGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 1426991 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||||||||||||||| || || || Sbjct 1426992 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCC 1427051 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 1427052 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGG 1427111 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| ||||| || Sbjct 1427112 GTGATGGTCTTGCCCGTCAG 1427131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921116642144