Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9 134 2e-26 seq2 120 3e-22 seq3 118 1e-21 >seq9 Length=896563 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| ||||| ||||||||||| || Sbjct 20695 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAA 20636 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| ||||| ||||| ||| Sbjct 20635 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 20577 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| ||||| || || || || | Sbjct 20576 TGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGA 20517 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 20516 CAAAGATCTGCAT 20504 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | ||||| || | ||| |||||| ||||| |||||||| || Sbjct 21186 CCTCCACGGAGACGAAGAACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAG 21127 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || ||||||||||| || || || |||| |||||||||||||| || Sbjct 21126 AGCGTACGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGG 21067 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||||| ||||| ||||| ||| | | | ||||| ||| || || Sbjct 21066 ATTCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCCGACGACTCAAC 21008 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||| || || ||||| || || || |||||||| ||||| Sbjct 21007 CTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || ||||| |||| || |||||||| || ||||| Sbjct 20923 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAA 20864 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||||||| |||||| |||| | ||| Sbjct 20863 GATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 20805 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | || || || || |||||||| || || | Sbjct 20804 TGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGA 20745 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 20744 CGAAGATCTGCAT 20732 Score = 105 bits (116), Expect = 8e-18 Identities = 124/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || ||||| |||| ||||||||||| || ||||| || | ||||||| Sbjct 20404 TGTAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCT 20345 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | || ||||||||| ||||||| ||||| ||| | | | |||||| Sbjct 20344 GGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCG 20286 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 ||| || || || | |||||||| ||||| || || || ||| Sbjct 20285 GACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTA 20241 >seq2 Length=4481979 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 720174 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 720115 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | ||||||||||||| || | || |||||||||| ||||||| ||||| Sbjct 720114 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGA 720059 >seq3 Length=3676950 Score = 118 bits (130), Expect = 1e-21 Identities = 131/172 (76%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 1426961 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1427020 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| ||| Sbjct 1427021 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1427079 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | |||||| || || || || | |||||||| ||||||||||| Sbjct 1427080 TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAG 1427131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238173904640