Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 320 2e-82 seq3 125 7e-24 seq2 125 7e-24 seq9 122 9e-23 >seq1 Length=4840925 Score = 320 bits (354), Expect = 2e-82 Identities = 548/784 (70%), Gaps = 17/784 (2%) Strand=Plus/Plus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAG 132722 ||| || || |||||||||| | ||| || ||| | |||| | || ||||||| Sbjct 902251 CATGAAGTCGAAGGGGTTGGACGAGTTCCAGACCTTCTCGTTGCCAA---GGGCGACGAG 902307 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 ||| | ||| || || ||||||||||| || ||||| | || || | | | || | | Sbjct 902308 CAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATGA 902366 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | ||| || || || |||||||| || |||||||| ||| || || ||| || Sbjct 902367 GCGACACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGA 902426 Query 132842 TTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900 | | | | || | || | | ||| || | | ||| |||| | || ||| ||| Sbjct 902427 TCTTGTTGAT-CGTGTCGGGGTGCGGGCGGCGGCGGAGGTGCGTGAAGAGCAGGCAGGCA 902485 Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960 |||||| |||| ||||||||| | || ||||| ||||| ||| || | ||||||| Sbjct 902486 AAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGC 902545 Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020 ||||||||||| || |||||||| || |||| ||||| ||| || ||||||| ||| Sbjct 902546 ATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGATACCC 902605 Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080 |||||||| ||||| || | |||||||||||||||| | | | | ||||||| Sbjct 902606 TCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGAACGCTGGTCCGAGATCCAG 902665 Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140 || || ||||| |||||||| | |||| ||| || || || |||||||| | ||| | Sbjct 902666 CGGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTGGAAC--A 902723 Query 133141 CGGAGTTTC-TCTTCCG-AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198 | | | | | || | || | ||| |||||||| ||| ||| ||| | |||| Sbjct 902724 GGTACTGCCGGCGGGCGTTGTCGCGGATGTACGTGTCGATCAGGAGCGAGTACGTCTCCG 902783 Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258 |||| | ||||||||| ||| || |||||||| || | |||||| | ||| | Sbjct 902784 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAACGTCTTGGCCTCGGAGATCTGGA 902843 Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318 | || ||| |||||||| || || ||||||||||| ||||| |||||||| | Sbjct 902844 CCTCACCGCAGAAGCGCTCGACGAGGTTCTCGTTGACGATACCGTCCGACGCGGCGAAGA 902903 Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGC 133375 | || |||||||||| |||||| | ||||||||||||||||| | ||||||||| Sbjct 902904 ATGCGAGCACGTGCTCGATGAAGTAGCGCTCGTTGTCGTTCAGTTTGTTGTCCCAGTCGT 902963 Query 133376 GCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | ||| || |||| | ||||||| ||||||| ||||| |||| || || |||| Sbjct 902964 GGAGGTCGGGGGCGAGGTTGATCTCCTCGGCGGTCCAGAACGAAGCCTGCGCCTTCTTGT 903023 Query 133436 ACAT 133439 |||| Sbjct 903024 ACAT 903027 >seq3 Length=3676950 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 || |||||||| ||||||||| | || |||||| || |||||| | | | |||| | || Sbjct 1427131 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAA 1427073 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| | ||||| ||||| ||||| | ||| || Sbjct 1427072 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGG 1427013 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||||||| |||||||||||||| ||||| |||| || Sbjct 1427012 CAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCT 1426953 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 1426952 CCACCTTGTCCTCCGT 1426937 >seq2 Length=4481979 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||| || |||| |||||| || | |||| | | | |||| | || Sbjct 720004 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 720062 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| |||||| ||||||| ||||| ||||| | ||| || Sbjct 720063 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 720122 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||||||| ||||||||||||||| ||||| |||| || Sbjct 720123 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 720182 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 720183 CCACCTCGTCCTCCGT 720198 >seq9 Length=896563 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || || ||| | || |||||| | || Sbjct 20732 ATGCAGATCTTCGTCAAGACTCTGACGGGTAAGACGATTACCCTTGAGGTCGAGTCTTCC 20791 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| ||||| |||||| | ||||| Sbjct 20792 GACA-CGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 20850 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||| || ||||| || |||| ||||||||| |||||||| Sbjct 20851 GCAGCGCCTTATCTTCGCGGGTAAGCAGCTTGAGGACGGTCGCACCCTCTCGGACTACAA 20910 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || ||||| |||| || || | ||||| || Sbjct 20911 CATTCAGAAGGAGTCGACTCTTCACCTTGTGCTCCG 20946 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| |||| |||||| || | Sbjct 20504 ATGCAGATCTTTGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 20563 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || || | ||||| ||||| || ||| ||||||| Sbjct 20564 GACACGATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 20622 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| || || || |||| |||||||| ||||||||| Sbjct 20623 GCAGCGTCTCATCTTTGCCGGCAAGCAACTCGAGGACGGTCGCACCCTGTCCGACTACAA 20682 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || || | || || ||| || | || || Sbjct 20683 CATCCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGTCTGCGCGGTGG 20730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || |||||||| || || ||||| | || || ||| | | Sbjct 20960 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 21019 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | ||||| |||||||| || ||||||| Sbjct 21020 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGACCA 21078 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || ||||| || || | || || ||| |||||||| Sbjct 21079 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGACGTACGCTCTCGGACTACAA 21138 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | ||||| || |||| || ||| Sbjct 21139 CATCCAGAAGGAGTCTACGCTCCACCTGGTTCTTCGT 21175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172599930880