Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 407 2e-108 seq2 183 4e-41 seq3 145 1e-29 >seq1 Length=4840925 Score = 407 bits (450), Expect = 2e-108 Identities = 804/1186 (68%), Gaps = 8/1186 (1%) Strand=Plus/Minus Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| |||||||| || |||| || | ||||| || | ||||| | || Sbjct 3047738 GGGGTCATGATACCACCGGCGGTCTCGATACCCATGGACAGGGGGGCGACGTCGAGAAGC 3047679 Query 6983 AACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 | ||||| || || ||| ||||| | | ||||| ||| ||||| | || Sbjct 3047678 AGGAGGTCCTGGGTAGCCTCGGAGGTCTCACCGTTGAGGATGGAGGCCTGGACGGCGGCA 3047619 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACC-GTTAAAATA 7101 ||||| ||||| ||||| |||||||| || | || | || || | || || Sbjct 3047618 CCGTAGGCGACGGCCTCGTCGGGGTTGATGGAGCGGTTGGGCTCGCGGCCAGAGAACATG 3047559 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||||| | | | || || || ||||| || ||||| |||||||| | ||||| || Sbjct 3047558 -TCCGAGACGAGCTTCTGGATCTTGGGGATACGGGTCGAGCCACCGACGAGGACGATCTC 3047500 Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221 || || || | || |||||||| | ||| || || || || || || ||||| Sbjct 3047499 GTTGACGTTGGCCTTGTCGATCTTGGCGTCACGGAGGACCTTCTCAACGGGCTCCATGGT 3047440 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 ||||| | |||| || || ||||| ||||| |||||||| || || || ||||| Sbjct 3047439 GGAGCGGAAGAGGTCCTGGCAGAGCTCCTCGAAACGGGCACGGGTGATCGAGGTGTAGAA 3047380 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341 || | |||||| | | ||| || || || || | || || || | || || | || Sbjct 3047379 GTCGATACCGTCGAAGAGCGAGTCGATCTCGATCGAGGTCTGGGCGGCAGACGAGAGAGT 3047320 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 ||||| || ||||| ||||| || || | |||||| |||||||| | ||| |||| | Sbjct 3047319 GCGCTTGGCACGCTCGCACGCGGTGCGGAGACGACGGAGGGCACGGGCGTTGCCGGTCAG 3047260 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461 || ||||| | || || || ||||| | |||||| | ||| | || || Sbjct 3047259 GTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGGTTGACGAGACGGTTGTCAAA 3047200 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521 || |||||||| | ||| || || || ||||| || ||||| || ||||| || | || Sbjct 3047199 GTCCTCACCACCAAGGTGGGTGTCACCGGCGGTAGCCTTGACCTCGAAGATGCCCTCCTC 3047140 Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581 ||| | | | || ||||| || ||||||||||| ||||| || ||||| |||||| | Sbjct 3047139 GATGGTAAGAAGAGAGACATCGAAGGTACCACCACCAAGGTCGAAGATGAGAACGTTCTT 3047080 Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 || | || | ||||| ||||||||||| ||||| || || || || || || || || Sbjct 3047079 CTCACCCTCGGTCTTCTTGTCGAGACCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGAT 3047020 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 ||||| || | || |||| || || | || || || || || || || ||||| Sbjct 3047019 GATACGGAGGACCTCAAGACCAGAGATGGTACCGGCGTCCTTGGTGGCCTGACGCTGCGA 3046960 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| |||||||| ||||| || | ||| || | | ||| | ||| || || | Sbjct 3046959 GTCGTTGAAGTAGGCGGGGACAGTGATGACAGCCTTGGAGACGGTGCCACCAAGGTAGGC 3046900 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || ||| | || ||||| ||| | || ||||| || || ||||| || | | ||||| Sbjct 3046899 CTCGGCGGTCTCCTTCATCTTGATGAGGACCATGGACGAGATCTCCTCGGGAGAGAACTG 3046840 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 ||| |||||| | || || | || ||| || | | | ||| || Sbjct 3046839 CTTCTGCTCACCGCGGTACTCGACCTGGATGTAGGGCTT---GGTTCCCTTGTCGATGAC 3046783 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 ||| | | ||| | ||||| ||| ||||||| ||| || ||||| | ||||| Sbjct 3046782 CTTGAAGGGCCAGTGCTTCATGTCGGACTGGACCTCGGCGTCAGAGAACTTGCGGCCGAT 3046723 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 ||||||||| || || ||||| ||||| | |||||||| || |||||||| || || Sbjct 3046722 AAGACGCTTGGCGTCGAAAACGGTGTTGTAAGGGTTCATCGCGACCTGGTTCTTGGCGGC 3046663 Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061 ||| ||||| ||||| || || || || ||||||||||| || ||||| || || Sbjct 3046662 GTCACCGATGAGACGCTC---CGAGTCGGTGAAGGCGACGTACGAAGGAGTCGTACGGTT 3046606 Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || |||||||| ||||| ||||| || | ||| |||||||||||| Sbjct 3046605 TCCCTGGTCGTTTGCAATGATTTCGACCCTGTCATTTTGCCAGACG 3046560 >seq2 Length=4481979 Score = 183 bits (202), Expect = 4e-41 Identities = 332/480 (69%), Gaps = 8/480 (2%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | |||| |||| ||||| ||| | || ||| Sbjct 1883166 TCCTCGAAACGGGCACGGGTGATGTTGGCGGAGAAGTCAATGCCGTTGTAGAGGGAGTCA 1883107 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | ||| || || || || ||||| | || ||||| || |||||||| |||| Sbjct 1883106 ACCTCGACGGTGGTCTGGGTGACG--GAAGAGAGGGTACGCTTAGCACGCTCACAGGCCG 1883049 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAA 7424 || | |||||| |||||||| |||| | || || || ||| | || || | | Sbjct 1883048 AACGGAGACGACGGAGGGCACGGGGGTCGTCCGAGATGTCGGCCTTGTTCTTGCGCTGGA 1882989 Query 7425 ACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTAT 7484 |||| | |||||| |||||| | ||||| || |||||||| | ||| || | Sbjct 1882988 ACTCGGCCTTGAAGTGCTCAAGGAGGGTGTTGTCGAAGTCCTCACCACCGAGGTGGGTGT 1882929 Query 7485 CCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAA 7544 | || || || || ||||| | |||| ||| || ||| | | ||||||||| | Sbjct 1882928 CACCAGCAGTGGCCTTGACGGCGAAGACACCGCCGGTGATGGAAAGGAGCGAAACATCGA 1882869 Query 7545 ACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGT-TCTTA-TC 7602 | |||||||| || ||||| || ||||| |||||| | || || ||| | | | || Sbjct 1882868 AGGTACCACCTCCGAGGTCGAAGATGAGGACGTTCTTCTCCTC--CTTGGACTGGGAGTC 1882811 Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCC 7662 ||||||||| || ||||| || || || || || || || ||||| ||| || ||||| Sbjct 1882810 GAGACCGTAAGCAATAGCAGCGGCGGTGGGCTCGTTGATGATACGGAGAACGTCGAGGCC 1882751 Query 7663 AGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 ||| || | | || || || || || | || || || ||||| |||||||| ||||| Sbjct 1882750 AGCGATGGCACCGGCGTCCTTGGTGGCAAGACGCTGGGAGTCGTTGAAGTAGGCGGGGAC 1882691 >seq3 Length=3676950 Score = 145 bits (160), Expect = 1e-29 Identities = 445/681 (65%), Gaps = 19/681 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || || || || || || |||| || Sbjct 3317438 TCAAAGTCCTCACCACCGAGGTGGGTGTCACCGGCAGTAGCAAGAACCTCGAAGACGCCG 3317497 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA---AATGAGT 7573 | ||||| | | ||| ||||| || ||||||||||| ||||| | ||||| Sbjct 3317498 TCCTCAATCGAGAGGAGCGAGACATCGAAAGTACCACCACCGAGGTCGTAGACAATGATC 3317557 Query 7574 --ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 ||| || | | | ||| ||| || || ||||| ||||| || || || || | Sbjct 3317558 TGACGCTCCT--CCTTGTCCTTGACACGGTCAAGGCCGTAGGCGATGGCGGCGGCGGTGG 3317615 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 | || || | | ||| || ||| ||||| ||||| ||| | || || | || || | Sbjct 3317616 GCTCGTTGACGAGACGGAGGACGTTGAGGCCGGCAATGGTTCCGGCGTCAATGGTGGCCT 3317675 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 || || | |||| ||||| || ||||| || ||||| |||| ||||| || || Sbjct 3317676 TGCGCTGAGCGTCGTCGAAGTACGCGGGGACGGTGACGACGGCGTGGGTGACGGGCTCAC 3317735 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 |||| || | || ||| | || ||||| |||| |||||||| | || ||||| || | Sbjct 3317736 CGAGGTAGGCCTCGGCGGTCTCCTTCATCTTGGAGAGAACCATGGCGGAGATCTCCTCGG 3317795 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC 7871 | | || | ||| | | || || ||| | |||||||| ||| ||| || Sbjct 3317796 CGGAGAAGTCCTTCTTGTTGCCCTTGGCGGTAACCTGGATCATGGGCTTA-CCG--GCCT 3317852 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 || || ||| | | ||| | ||| | ||| || |||| ||||||| ||| Sbjct 3317853 TGGAGACAACGGCGAAGGGCCAGTGCTTCTTGTCGCGCTGCACCTCGGGGTCCGAGTACT 3317912 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | |||| |||||||| ||||| || || ||||| |||||| || | |||| Sbjct 3317913 TGCGGCCGACGAGACGCTTGGCATCGAAGACGGTGTTGGACGGGTTCTGGGGAGCCTGGT 3317972 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 |||| || ||||| || || ||||| || | | | || || |||| | || || | Sbjct 3317973 TCTTGGCGGCGTCACCAATCAGACGCTCCTCGT---CGGTGAAACCGACCCAAGAGGGAG 3318029 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC---GCGGTCGTTTTGCCAGACGC 8108 | | || || || ||||||||||| || || || || | | | || || |||| Sbjct 3318030 TGATACGGTTACCCTGGTCGTTCGCGATGATCTCAACCTTTCCGCCCTTCTG---GACGG 3318086 Query 8109 CGACGCACGAATACGTTGTTC 8129 |||| ||||| || || |||| Sbjct 3318087 CGACACACGAGTAGGTAGTTC 3318107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132545946880