Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 194 2e-44 seq1 116 5e-21 seq9 100 4e-16 >seq3 Length=3676950 Score = 194 bits (214), Expect = 2e-44 Identities = 367/535 (69%), Gaps = 9/535 (2%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||| | | |||||||| || || || ||||| || Sbjct 2183754 CCCCCAGCACATGCTCATGCGTGTCTCCGTTGGTATCCACGGTGACGACATTGAGAAGGT 2183813 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || ||| | | | || |||| |||||| | || || |||| Sbjct 2183814 CATTGAGACCTACAACCTTATGAGCGAGCGCTAC-TTCACCCACGCCTCGCCCACTCTCT 2183872 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||| | ||||| || |||| ||||| ||| |||||| | || | ||||||| Sbjct 2183873 TCAACTCGGGTACTCCCCACGCCCAGATGTCGTCTTGCTTCCTTGTCGCCATGAAGGAGG 2183932 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || ||| | ||||| |||| |||||||| |||||||| ||||| ||| || | Sbjct 2183933 ACTCGATCGACGGCATCTACGACACTCTCAAGACCTGTGCCCAGATCTCCAAGACTGCCG 2183992 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTAC 111907 |||||||||| | |||||||| | || | |||| | | ||||| ||| || || Sbjct 2183993 GTGGTATCGGTCTCCACATCCACAACATCCGTGCCA--AGGGCTCGTACATTGCCGGAAC 2184050 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || | || | ||||| | || ||||| || | | |||| || || || || Sbjct 2184051 CAACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCTACTGCTCGTTA 2184110 Query 111968 TGTAAACCAAGCTGG---GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || |||| | ||| ||| ||| | |||| ||||||||||||| ||||| Sbjct 2184111 CGTCGACCAGGGTGGCAACAAGCGCCCGGGTGCCTTCGCTATCTATCTTGAGCCCTGGCA 2184170 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| || ||| | || ||||| || | ||| ||||| || | ||||||| || Sbjct 2184171 CGCCGACATCTTCGACTTCCTCGACCTCCGTAAGAACCACGGAAAGGAGGAGGTTCGTGC 2184230 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 ||| || ||||||| ||| |||||||| | || |||||||||||| | || ||| Sbjct 2184231 CCGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 2184285 >seq1 Length=4840925 Score = 116 bits (128), Expect = 5e-21 Identities = 119/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| ||| |||| || || || |||||||||||||||||||| || ||| ||| | Sbjct 902634 GAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTC-GCGTC 902576 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||||||||||| || |||||||| || ||| ||||| |||||||| || Sbjct 902575 CATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCAT 902516 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| || |||||||| || ||| || ||||| Sbjct 902515 CTCGCGCGACGAGGGCCTGCACACCGACTTTGC 902483 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 102190 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGG 102248 |||| || || ||||| ||||| || |||||||| || || || ||| || || | ||| Sbjct 1301155 TCGCGTTCGCCTGTGTGGAGGGCATTTTCTTCTCGGGGTCATT-TGCAGCAATCTTCTGG 1301097 Query 102249 CTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGAC 102308 || |||||||| || |||||| |||| | |||||| |||||||||||| || ||| Sbjct 1301096 CTGAAGAAGCGCGGCCTCATGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGAGAC 1301037 Query 102309 GAGGGACTCCAC 102320 ||||| || ||| Sbjct 1301036 GAGGGTCTGCAC 1301025 >seq9 Length=896563 Score = 100 bits (110), Expect = 4e-16 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 16113 ||| || | |||||||||||| || ||||||| |||||| || || ||| | || Sbjct 348323 CTTGCCGATGGCATCAATCTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTGGCCGT 348264 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | | ||||| || || || || || ||| ||||| || ||||||||||| || | | Sbjct 348263 CG-CGAAGAGGTCGCGCACGCGGGAGGGGCCGACACCGACGAACATCTCCACGAACTCGG 348205 Query 16174 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 |||| || | || |||||| || || | || ||||| | || ||||| || Sbjct 348204 AACCGGA-CACAGAGAGGAAGGGCACCTTGGCCTCGCCCGCCGTCGCCTTCGCGAGCAGC 348146 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||||||||| || ||| || | ||||| ||| || || |||||||||||||| Sbjct 348145 GTCTTACCCGTTCCCGGCGGGCCGGAGAGGATGGCGCCGCGAGGAATCTTGGCGCC 348090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742151703040