Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 167 3e-36 seq9 107 2e-18 seq1 107 2e-18 seq10 98.7 1e-15 >seq3 Length=3676950 Score = 167 bits (184), Expect = 3e-36 Identities = 671/1046 (64%), Gaps = 13/1046 (1%) Strand=Plus/Minus Query 109989 CTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC 110048 || ||||| |||| | |||||||| || || || || || || ||||| || || || Sbjct 2184903 CTGGGCCATCTCGCACGAAGCCTCGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGGAG 2184844 Query 110049 ATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGC 110108 || | |||||| ||| |||||||||| | | || || || || Sbjct 2184843 GTTGAGCTGGCGAGCCTCACGCGAGTCGAAGGGCATGCGGAGGGCCATGAAGGTGTCGGC 2184784 Query 110109 TAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC 110168 |||||||| ||||||||||| | |||||| || |||||| ||| || || Sbjct 2184783 GAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGCCTCGGG 2184724 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 |||||||| ||||||| ||||||| | | || || || || ||| ||||| Sbjct 2184723 GACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACGACCTTGGTGAT 2184664 Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 || || || || | | | ||| | || || ||||| ||||| | ||||| || Sbjct 2184663 CTCGTGCAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCAGGGAGGGC 2184604 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 || || ||||| |||||||| | | ||| || | ||| || | || || || Sbjct 2184603 GATCGAGGCAAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATGATCTCAGT 2184544 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT-GCATG 110407 || | |||||| ||| ||| || | || || ||| || || ||| ||| ||| | Sbjct 2184543 GCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGGTTCGCA-G 2184485 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 | ||||| ||||||||| | || ||| || || ||||| | || || ||||| || Sbjct 2184484 CGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATGGCGAACC 2184425 Query 110468 ATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 | | | || | || || || ||||| | | || | |||||| | || Sbjct 2184424 AGAGCTTCTG-AGCCTTGATAGTCTTGCG--ACCCTTGCCGGCACGCTCGTAGCTCTCGT 2184368 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 ||| | ||| || |||| || || || | || || || | | || || | Sbjct 2184367 ACAGCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTCGGCCGGGCACA 2184308 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 ||||| ||| | || | ||| || | ||||||||| ||||| | ||||| | | Sbjct 2184307 TGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGG 2184248 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 | |||| ||||||||| |||| |||| || | || ||||| || || || | | Sbjct 2184247 CGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACGGAGGTCGAGGA 2184188 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761 |||| | ||| || | |||||| || || ||||||| ||||| || ||| || Sbjct 2184187 AGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACCCGGGCGCTTGT 2184128 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 || |||||| || || || || || || | | || | | |||||| || | || | Sbjct 2184127 TGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATGGGGACGATAC 2184068 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | || | || || || || ||| || |||||||| |||| |||||| | Sbjct 2184067 CGTTCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCTTGGCACGGATGTTGTGGATGT 2184008 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAA 110940 | | ||| |||||||| || ||| || || ||||| ||| |||| || | || Sbjct 2184007 GGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTCT-TGAGAGTGTCGTAG 2183949 Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000 || || || ||||| || |||| |||| | || |||||||| |||||||| | | Sbjct 2183948 ATGCCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGACGACATCTGGGCGTGG 2183889 Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGG 111026 || || |||| |||||||| || || Sbjct 2183888 GGAGTACCCGAGTTGAAGAGAGTGGG 2183863 Score = 96.9 bits (106), Expect = 4e-15 Identities = 284/435 (65%), Gaps = 6/435 (1%) Strand=Plus/Minus Query 109422 ACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGT 109481 ||| || |||||||| |||||| |||| | ||||| || | ||| | || | | Sbjct 2185464 ACCGGTCTTGAGACCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGA 2185405 Query 109482 CGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGC 109541 || || | | | ||| | |||||| ||||| |||||||| ||||| || || Sbjct 2185404 GGGGTTCGCGAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAACGCTCCACGGTCGGC 2185345 Query 109542 CGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGAT 109601 || | |||||| | ||| || || ||||||||||||||||| | |||||| Sbjct 2185344 AGCGAGGTCGATAACCGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCTTGAT 2185285 Query 109602 ATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTT 109661 |||||||| |||| ||||| ||||| ||||| || | | ||||| | ||| Sbjct 2185284 GTCATCGGGGATGTTGGGGATGTGCTGAATGGAGCCGCCGGAAGCGATGATGAGGTTCTT 2185225 Query 109662 CATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTG---AC 109718 |||||| | ||||| |||| || | | ||| || || || | | || Sbjct 2185224 CATCTCCTCGTCCCAGATGCCGAGGTTGATCAAGTCG--CGCAGGA-GCCAGGGGCATAC 2185168 Query 109719 CACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAA 109778 || | || ||||||| || || || ||| | | | |||||||| ||||| Sbjct 2185167 GACCGCGAAGTCACCAGACAGGACACGGCGCGAGTAAAGCATCGAGGTGTAGGGCTCGAA 2185108 Query 109779 ACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAG 109838 ||||| || ||| ||||| || | ||||| || |||||||||||||| | || || Sbjct 2185107 GCACTCGTTCCAGCCGAGGATCTGCGAGGTGGAGGCAGTGGGCATGGGAGCAACAAGGAG 2185048 Query 109839 ACTGTTTCGGAGACC 109853 ||| |||| ||| Sbjct 2185047 CGAGTTGCGGACACC 2185033 >seq9 Length=896563 Score = 107 bits (118), Expect = 2e-18 Identities = 264/390 (68%), Gaps = 19/390 (5%) Strand=Plus/Minus Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGG 11650 ||||||||||||| || ||| |||||||| | || || ||||| |||||| | Sbjct 348408 CGAAACCGTCCATCTCGACGAGGAGCTGGTTCAAAGTGCTCTCGCGCTCGTCGTTGCCGC 348349 Query 11651 GCA---TACCACC--TGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705 | | || || ||||| ||| ||| |||| || |||||||| |||||||| | Sbjct 348348 CAAAGTTGCCGCCCTTGCCGCGCGC--CTTGCCGATGGCATCAATCTCGTCGATGAAGAT 348291 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTT-CGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 ||| ||||| ||| | || | || |||| || || || || || | || | Sbjct 348290 GATGCACGGCGCGTTCTT-CTTGGCCGTCGCGAAGAGGTCGCGCACGCGGGAGGGGCCGA 348232 Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCA--GAACACTGA-ATGAAGGGAACATTAG 11821 |||| ||||||||||| ||||| | ||| | | |||| || | |||||| || || | Sbjct 348231 CACCGACGAACATCTCCACGAACT---CGGAACCGGACACAGAGAGGAAGGGCACCTTGG 348175 Query 11822 ACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAA 11881 ||| || || | || ||||| || ||||||||||| || || | || | ||| | Sbjct 348174 CCTCGCCCGCCGTCGCCTTCGCGAGCAGCGTCTTACCCGTTCCCGGCGGGCCGGAGAGGA 348115 Query 11882 GGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939 |||||| || || |||||||| || |||| ||| ||| | |||| ||| ||||| Sbjct 348114 TGGCGCCGCGAGGAATCTTGGCGCCGAGCTTC--TCGTACCGCGCCGGCTCCTTCAGGAA 348057 Query 11940 GTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | || | |||| | |||||||| || Sbjct 348056 CTTGACGAACTCCATGATCTCCTCCTTCGC 348027 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 163000 TACGAAGGTGCGACGGTTCTTGAAGCCCACAAAGGTGCA-TATTACACACCGATTACAGC 163058 |||||||| ||||| || | || |||| | |||| | ||| |||| |||||| | | Sbjct 503611 TACGAAGGCGCGACCGTCATCGA-GCCCTCGAAGGGTTACTATGACACGCCGATTGCTAC 503669 Query 163059 CCTAGATTTCGAAGCACTGTATCCATCAATCATGATGGCACATAATCTGTGCTACTCTAC 163118 || ||||||| | || ||||| || |||||||||||||| |||||||||||| | || Sbjct 503670 GCTCGATTTCGCCTCGCTCTATCCGTCTATCATGATGGCACACAATCTGTGCTACACCAC 503729 Query 163119 ACTCGT 163124 |||||| Sbjct 503730 ACTCGT 503735 >seq1 Length=4840925 Score = 107 bits (118), Expect = 2e-18 Identities = 340/516 (66%), Gaps = 11/516 (2%) Strand=Plus/Plus Query 119226 TCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATAAAGTCAAAAGGATTTTTG 119285 |||||||| || | ||| || | ||| ||||| | ||||| ||||| || || || Sbjct 902213 TCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGAC 902272 Query 119286 GAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACGATCGGAGACATACTCGAT 119344 |||||||||| | | |||| |||| || ||||| || | |||| ||||||| Sbjct 902273 GAGTTCCAGACCTTCTCGTTG-CCAAGGGCGACGAGCAGACGGTCCGCGACAAACTCGAT 902331 Query 119345 ATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACACGGG-AGAGCATCGAGGA 119403 || | | |||| | | ||||| || ||||| ||||||| || || ||| || Sbjct 902332 GTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCG-ACACGGGGAGGGCCTCGGTGA 902390 Query 119404 TGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTGAATAGTTTCTGTCGATG 119463 ||| | || |||||||| || || || || | ||| || || || || | | Sbjct 902391 GGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTGTCGGGGTGCG 902450 Query 119464 GTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTTGATGAAGCCCTTCATCCC 119523 | | | | | | | || | | |||||| || || || || || || | Sbjct 902451 GGCGGCGGCGGAGGTGCGTGAAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGTCGC 902510 Query 119524 GAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAA 119583 | ||||||||||| || ||| || || |||||||| || | ||||| ||||| | Sbjct 902511 GCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGA 902570 Query 119584 AGATGGCACAAAAAC-TTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGA 119642 |||||| || ||| ||||| |||||||| ||||| || |||||| |||| || Sbjct 902571 AGATGG-ACGCGAACGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGATGAGG 902629 Query 119643 CGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACTTGAGAGCCCAGTTGGCCTTACG 119698 ||||| || || | || | || ||| || ||| ||||||||||| |||||| Sbjct 902630 CGCTC-GCCGAACGACGAACGCTGGTCCGAGATCCAGCGGAGAGCCCAGTCGGCCTTCTT 902688 Query 119699 CTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 || |||||||||| || | |||||| | ||| || Sbjct 902689 CTTGATGCAGGGGATGGTCTCGATGGCCTGGAACAG 902724 >seq10 Length=811312 Score = 98.7 bits (108), Expect = 1e-15 Identities = 226/334 (68%), Gaps = 15/334 (4%) Strand=Plus/Minus Query 11553 GTTTGTAGCGGCAATGACTACAATGCCAGTCTCATT-GTCGAAACCGTCCATTTCTGTGA 11611 ||| |||||||| | || | ||||| ||| | | |||||||||||||| || | Sbjct 260581 GTTGGTAGCGGCGACAACAATGATGCC-GTCAGACTCGTCGAAACCGTCCAGCTCGACCA 260523 Query 11612 GAAGCTGGTTGATCGTCTGTTCACGCTCATC-GTTGGAGGGCATACCACCTGCCGAACGC 11670 | |||||||| | |||||| | |||| | || || | | ||||| ||| Sbjct 260522 GGAGCTGGTTCAGCGTCTGCT-----TCATGTGCTGCTGGTCCTTG-----GCCGAGCGC 260473 Query 11671 TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 || || | |||||| | ||| |||||||| || ||| || ||||| || ||| Sbjct 260472 TTGCCGCCCATAGCGTCGAGCTCGTCGATGAAGACAATAGCGGGGGCCTTGGCGCGCGCC 260413 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | ||| || || || || ||||| || || ||||| ||||||||||| |||| Sbjct 260412 GCCTTGAAGAGGTCGCGCACGCGCTTGGCACCGACACCGACGAACATCTCGTCGAATCCA 260353 Query 11791 GCGGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | |||| | ||| ||| || || | || ||| || ||||| || || |||||||| Sbjct 260352 GATCCAGATGCGAAGAA-GAAAGGCACGTCAGCCTCGCCGGCGATAGCACGGGCGAGGAG 260294 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 ||||||||| || || || | ||| | ||| ||| Sbjct 260293 AGTCTTACCAGTTCCCGGGGGACCGGTGAGGAGG 260260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975764409600