Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 167 3e-36 seq1 118 1e-21 seq9 96.9 4e-15 >seq3 Length=3676950 Score = 167 bits (184), Expect = 3e-36 Identities = 671/1046 (64%), Gaps = 27/1046 (3%) Strand=Plus/Minus Query 106280 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 106339 || |||||||| || ||||| | ||| | || | ||| ||||| || || || ||||| Sbjct 2184788 TCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 2184730 Query 106340 GTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396 ||| ||||| || | || | ||||| ||| || || ||| || | | Sbjct 2184729 --CTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACGACC 2184672 Query 106397 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 106456 || ||||| || || || || | | || | || ||||| ||||| | Sbjct 2184671 TTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCA 2184612 Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || |||||||| || || | ||||| || || |||||| | | |||||| | Sbjct 2184611 GGGAGGGCGATCGAGGCAAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATG 2184552 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| ||| || || || | | || ||||| ||| | Sbjct 2184551 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 2184492 Query 106577 TT-GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAAT 106635 || ||| || ||||||||||||||| |||| || ||||| ||||| | || || || Sbjct 2184491 TTCGCA-GCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGAT 2184433 Query 106636 TGCCTTCCACA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTA 106692 || ||| | | || | | || | || | ||| ||| | || | | |||||| Sbjct 2184432 GGCGAACCAGAGCTTCTGAGCCTTGATAGTCTTGCGA---CCCTTGCCGGCACGCTCGTA 2184376 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 | ||| || || ||||||||| |||||| ||| || || || | | Sbjct 2184375 GCTCTCGTACAGCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTCGGC 2184316 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || || | || | ||| | || | ||| || ||||||||||| ||||| | || Sbjct 2184315 CGGGCACATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGAGAT 2184256 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||| |||| | ||||| || | ||| |||| || | || ||||| || | Sbjct 2184255 CCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACGGAG 2184196 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 106932 || ||||| || | ||| || |||||||| ||||||||||||| |||| | ||| Sbjct 2184195 GTCGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACCCG- 2184137 Query 106933 TCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | ||| ||| | || | || || || || || |||| | | || ||||| Sbjct 2184136 --GGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCAT 2184079 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTC 107044 || | ||||| | || | || || || || ||| ||||| | |||| | Sbjct 2184078 GGGGACGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCT--TGGCACGG 2184021 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | | |||||||| | || ||||| || || ||| ||||| || ||||| | | Sbjct 2184020 ATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTCTTG 2183961 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 ||||| | ||||| |||| ||| ||||||||||| |||||| |||||||||| ||| Sbjct 2183960 AGAGTGTCGTAGATGCCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGACGAC 2183901 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 ||||| | || ||||| | |||||||| || || | ||||| |||| | Sbjct 2183900 ATCTGGGCGTGGGGAGTACCCGAGTTGAAGAGAGTGGGCGAGGCGTGGGTGAAGTAGCGC 2183841 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | | ||| || ||| ||||| | ||| |||||||| || |||||||| || | | Sbjct 2183840 TCGCTCATAAGGTTGTAGGTCTCAATGACCTTCTCAATGTCGTCACCGTGGATACCAACG 2183781 Query 107285 GCCACACGCATAAACATGTATTGGGG 107310 | |||||||| | ||||| ||||| Sbjct 2183780 GAGACACGCATGAGCATGTGCTGGGG 2183755 >seq1 Length=4840925 Score = 118 bits (130), Expect = 1e-21 Identities = 236/342 (69%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155 ||| ||||| |||| ||| |||| ||||||| | |||| || | |||||| ||||| Sbjct 902305 GAGCAGACGGTCCGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 902364 Query 117156 GAGATTACATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 117214 ||| ||| ||| || || || || |||| | | ||| |||| || ||||| || | Sbjct 902365 GAGCG-ACACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCCTCCTTGA 902423 Query 117215 CGATGGCGTGGATAGTTTCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTCCACG 117273 ||| || ||| || |||| ||| || | || | | |||||||| | Sbjct 902424 TGATCTTGTTGATCGTGTCGGG-GTGCGGGCGGCGGCGGAGGTGCGTGAAGAGCAGGCAG 902482 Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || ||||| || || || || || || || ||||| ||||| Sbjct 902483 GCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCG 902542 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | ||| ||| || || ||||||||||| Sbjct 902543 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGC-GAACGAGCCAGAGAAGAAGAT 902601 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 |||||| || || || || | ||||||||| |||| || Sbjct 902602 ACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGA 902643 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| |||||| ||||| || || |||||| | ||| |||||| || Sbjct 1301025 GTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAGAAGGTCAAACCTCCCATGAGGCC 1301084 Query 117345 CCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 |||||||||| ||| | || || ||| |||||||| |||||||| || |||||||||| Sbjct 1301085 GCGCTTCTTCAGCCAGAAGATTGCTGCA-AATGACCCCGAGAAGAAAATGCCCTCCACAC 1301143 Query 117404 ACGCAAACGC 117413 | || ||||| Sbjct 1301144 AGGCGAACGC 1301153 >seq9 Length=896563 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 9420 ||| || | |||||||||||| || ||||||| || || || || ||| || || Sbjct 348323 CTTGCCGATGGCATCAATCTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTGGCCG- 348265 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 | | ||||| ||||| || | || ||| ||||| || ||||||||||| || | | Sbjct 348264 TCGCGAAGAGGTCGCGCACGCGGGAGGGGCCGACACCGACGAACATCTCCACGAACTCGG 348205 Query 9481 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 |||| || | || |||||| || || | || ||||| | || ||||| || Sbjct 348204 AACCGGA-CACAGAGAGGAAGGGCACCTTGGCCTCGCCCGCCGTCGCCTTCGCGAGCAGC 348146 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||||||||| || ||| || | ||||| ||| || || |||||||||||||| Sbjct 348145 GTCTTACCCGTTCCCGGCGGGCCGGAGAGGATGGCGCCGCGAGGAATCTTGGCGCC 348090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980564007680