Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9 156 9e-33 seq2 122 2e-22 seq3 116 8e-21 >seq9 Length=896563 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||| ||||| || ||||| ||||| || | || || | || || || Sbjct 20940 ACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTCCTCA 20881 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||||||||| || || ||||| || ||||| || || ||||| || Sbjct 20880 AGCTGCTTACCCGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGG 20821 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| ||| || || |||||||||| |||||| Sbjct 20820 ATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGTCTTA 20761 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | ||||| Sbjct 20760 CCCGTCAGAGTCTTGACGAAGATCTGCAT 20732 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| || || ||||| || || || ||||| || | || || | ||||| || Sbjct 21169 AACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTC 21110 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| || || || ||||| ||||| || || || ||||| || Sbjct 21109 GAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTG 21050 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| || ||||||||||| || || || || || | |||||| Sbjct 21049 AATCTTGGACTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTT 20990 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 20989 ACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 102 bits (112), Expect = 2e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||| || | || || ||||||||||| || ||||| || || || || | Sbjct 20404 TGTAGTCAGAAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCT 20345 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| ||||| |||||||| ||||| || || || ||||||||| || |||||||| | Sbjct 20344 GGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGG 20285 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || |||||||| | ||||| || || Sbjct 20284 ACGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 20251 >seq2 Length=4481979 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| || || | || || ||| Sbjct 720191 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 720132 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || |||||||| || ||||| || Sbjct 720131 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 720072 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || |||| ||||| Sbjct 720071 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTA 720012 Query 195112 CCTGT 195116 || || Sbjct 720011 CCGGT 720007 >seq3 Length=3676950 Score = 116 bits (128), Expect = 8e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| || | || || | || || ||| Sbjct 1426944 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 1427003 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 1427004 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 1427063 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| || || || |||||||| | ||||| Sbjct 1427064 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 1427123 Query 195112 CCTGTCA 195118 || |||| Sbjct 1427124 CCCGTCA 1427130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481145112544