Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq1 107 3e-18 >seq1 Length=4840925 Score = 107 bits (118), Expect = 3e-18 Identities = 299/456 (66%), Gaps = 33/456 (7%) Strand=Plus/Minus Query 82015 CCGGTGGAGCCGAAACCGCCGGCGCCGCGCGCGGTCGAGGCGAGGTCATCGACCTCGACG 82074 |||||||||||||| ||||||||||||||| ||| ||| |||| || ||||||| | | Sbjct 2504734 CCGGTGGAGCCGAAGCCGCCGGCGCCGCGCTGGGTGGAGTCGAGCTCGTCGACCTGGCGG 2504675 Query 82075 ACGGGCACGATCAGGCACTGCTCAAGGATGATCTGGGCGATCCGGTCGCCC----GGATT 82130 | ||| | || | | |||||||||||| ||||||||| ||||||||| || | Sbjct 2504674 ATGGGTGCCATGGCGATCCGCTCAAGGATGAGCTGGGCGATACGGTCGCCCTGCGCGACT 2504615 Query 82131 GATCACCACGTTC--TCGCCGTA----GAACGGCGCGCCGAAGACGTCGGCCTGCTTGCC 82184 ||| || | | | || || ||| | | | || |||||| | || Sbjct 2504614 GATTGTCAGTTGCAAACTCCATATTTTGAA---CTCACTCTTGAAGTCGGCGTCGTT--- 2504561 Query 82185 GTGGTGGGTCAGGATGACCTTGACCTCGCCGGTGTAGTCCTCGTCCACCACGCCGGCCAG 82244 ||||| | |||| |||||||||||||||| |||||| ||| || |||||||| Sbjct 2504560 GTGGTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGCAGTCGACGACGCCGGCGCC 2504501 Query 82245 GACGCCCAGGCC---CTNNNNNNNNNNNNNNGAGCGGGGCGCGACGCGGGCGTAGGTGCC 82301 |||| | | ||| || ||||| ||||||| ||| |||| || Sbjct 2504500 GACGTCGATGCCGTGCTTGGCCGCGAGGCCCGAGCGCGGCGCGATGCGTCCGTACGT--- 2504444 Query 82302 TTCGGGCGCGGTC---ATCGCCAGCCCCGTCGACAGGAGCGCGCGCTCCCCAGGC-CGCA 82357 |||| || | || |||| | |||| ||| | | | | || | ||| | | Sbjct 2504443 CTCGGCCGGGATCGCGATCGAGATACCCGCCGAGACTA-TTCCCTTGCCGCGGGCGGGGA 2504385 Query 82358 GAGTCACCTTCTCGGTCCCGTCATAGTAGACGTCCAGGCCGGCGGCCTTGGGCGAGCCGC 82417 | ||| | | ||||| || ||| | ||| |||||| | ||||||||||| Sbjct 2504384 GCGTCGCGTCCTCGG------CAGCGTACAGGTCGTAGCCGGCCGAGAGGGGCGAGCCGC 2504331 Query 82418 GCGTCGGCAGCTTGGCGGTCGGCGTCAGGCGCTTGA 82453 |||| |||| ||| ||| |||| |||||| |||||| Sbjct 2504330 GCGTGGGCACCTTCGCGTTCGGGGTCAGGAGCTTGA 2504295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715775713689600