Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 358 1e-93 seq1 343 3e-89 >seq3 Length=3676950 Score = 358 bits (396), Expect = 1e-93 Identities = 1145/1746 (66%), Gaps = 55/1746 (3%) Strand=Plus/Minus Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 || || | ||| || ||||| |||||| ||||| | | | ||| || || | ||| Sbjct 2185394 AGGTGGATGTTGAGCGACTGCGACTGGTCGATGAACGCTCCACGGTCGGCAGCGAGGTCG 2185335 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 || | | |||| |||| |||||| || |||||| |||| | |||| ||| || ||| Sbjct 2185334 ATAACCGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCTTGATGTCATCGGGG 2185275 Query 212808 AAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCC 212864 | | |||||||| ||| | || || | | ||| | || | | ||| ||| Sbjct 2185274 ATGTTGGGGATGTGCTGAATGGAGCCGCCGGAAGCGATGATGAGGTTCTT---CATCTCC 2185218 Query 212865 TCGTTCCAGAGGCCCCTGGTC-TCCAG--GCACTTGA-CCAGGTGAGGGTTGACTATCTG 212920 |||| ||||| ||| | | || || || | || ||||| || || | | Sbjct 2185217 TCGTCCCAGATGCCGAGGTTGATCAAGTCGCGCAGGAGCCAGG----GGCATACGACCGC 2185162 Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980 ||||||||| || || || | | | ||||| | || ||||||||||||| || ||| Sbjct 2185161 GAAGTCACCAGACAGGACACGGCGCGAGTAAAGCATCGAGGTGTAGGGCTCGAAGCACTC 2185102 Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040 ||| || || ||||| | ||| ||| |||||||||||||| || ||||| ||| Sbjct 2185101 GTTCCAGCCGAGGATCTGCGAGGTGGAGGCAGTGGGCATGGGAGCAACAAGGAGCGAGTT 2185042 Query 213041 CCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACA 213099 | || ||||||| ||| ||| ||||| || |||| | ||||||||| | Sbjct 2185041 GCGGACACCGTGCTGGCCAATGTTGGCGCGGA-GCTCAGTCCAGTCCCAG---------A 2184992 Query 213100 GGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGC 213159 |||| | || ||| ||| | ||| ||| | |||| | || ||| | Sbjct 2184991 GGTCGGTGGGCTCAACGCCCCAGAGGTCGGGCTGGATCTTGCCCTGCGACATGGGCGAAC 2184932 Query 213160 CCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAG 213219 ||| || |||| ||| ||| ||| || ||||| |||||| || |||| ||||||| Sbjct 2184931 CCTCATACGAGGGGTACTTGCCGAGCTTCTGGGCCATCTCGCACGAAGCCTCGAGGGCAG 2184872 Query 213220 CGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGG 213279 ||| ||||||||| || || |||| |||||||| ||||| | || ||||| Sbjct 2184871 CGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAGCTGGCGAGCCTCACGCGAGTCGAAGG 2184812 Query 213280 GCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGT 213339 |||| | | ||| || || || |||||||| |||| |||| ||| | || Sbjct 2184811 GCATGCGGAGGGCCATGAAGGTGTCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGT 2184752 Query 213340 GTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC-AGTCGATGATCTT 213397 | | || ||| || ||| | || ||| | |||||| |||||| ||| ||||| || Sbjct 2184751 GGCGCATGTTCGAGTTGCGCGC-CTCGGGGACGGGGTAGTAGTTGCGAGT-GATGACCTG 2184694 Query 213398 GTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTA 213457 || |||||||||||| | || ||||||| | | ||| | || | | | | | Sbjct 2184693 GTCAAGGTTGCGGGTGACGACCTTGGTGATCTCGTGCAGCTTCTTGAAGTCGTAGGTCTT 2184634 Query 213458 GCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC 213517 | | || | || || |||| |||||||| ||| |||||||| ||||| ||||| Sbjct 2184633 GGTCTCGAAGTTGACGAAGGCAGGGAGGGCGATCGAGGCAAGGTTGCACACGGCAACCTC 2184574 Query 213518 CT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCA 213576 | | ||| | | |||||| |||||||| ||||| |||||| | ||||||||| | Sbjct 2184573 ATCGGGAGAC-GAGTACTCAATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGA 2184515 Query 213577 GGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGG 213636 ||| ||| ||||| ||||| ||| |||| ||||||||||||||| |||| |||| Sbjct 2184514 GGTGCTGCTGGTTGGACTTGCGGTTCGCAGCGTCCTTGTAGAGCATGAAGGGACCACCGG 2184455 Query 213637 TCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696 |||| ||| | | | || || | |||||| | | ||||||| | | || Sbjct 2184454 TCTCGGTCTGAGCCTCAAGGATGGCGAACCAGAGCTTCTGAGCCTTGA-TAGTCTTGCGA 2184396 Query 213697 CAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCC 213756 | | | ||| | |||||| ||||| |||| | ||| || | ||| Sbjct 2184395 CCCTTGCCGGC--ACGCTCGTAGCTCTCGTACAGCTTCTCGAACTCCTCAGAGTGGACGT 2184338 Query 213757 TGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTC-ATCTCTGACT 213815 | | || || || || || || ||||||||| ||||||| ||||| ||| ||| Sbjct 2184337 CGGCGAGGCCAGGGCACTCGGCCGGGCACATGAGGGTCCAGTCGCCGTCGGACTC-GACA 2184279 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 | || |||||| ||||| | || ||| || ||| ||| ||||| | || | ||| Sbjct 2184278 CGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCC 2184219 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| ||| ||| || || || || || ||||| |||||||| |||||||| ||||| Sbjct 2184218 TCCTTTCCGTGGTTCTTACGGAGGTCGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCA 2184159 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACC 213992 | ||||| || ||||| |||| || | ||||| |||||||| || | || Sbjct 2184158 AGATAGATAGCGAAGGCACCCGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTA 2184099 Query 213993 ATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATA 214052 || | || || || | ||| || | ||||| || | ||||||||||| || || Sbjct 2184098 GCGTCGTAGGCACGGAGCATGGGGACGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATG 2184039 Query 214053 TACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAG 214112 |||||||| ||| | | |||| ||| ||| || || |||||||| ||||||| Sbjct 2184038 TACGAGCCCTTGGCACGGATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAG 2183979 Query 214113 ATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTC 214172 ||| ||| ||| | | | ||| || ||||||| | || ||| || | | | Sbjct 2183978 ATCTGGGCACAGGTCTTGAGAGTGTCGTAGATGCCGTCGATCGAGTCCTCCTTCATGGCG 2183919 Query 214173 AGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGAGTTGAAAAGCGTGGGGC 214230 | | |||||| ||| | || |||| ||| ||| || |||||||| || ||||| Sbjct 2183918 ACAAGGAAGCAAGACGACATCT-GGGCGTGG-GGAGTACCCGAGTTGAAGAGAGTGGGCG 2183861 Query 214231 TGGCATGGATCA--TA-AACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGA 214287 ||| ||| | | || || | | | || |||||||||| | ||| | Sbjct 2183860 AGGCGTGGGTGAAGTAGCGCTCGCT---CATAAGGTTGTAGGTCTCAATGACCTTCTCAA 2183804 Query 214288 TGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGG 214347 |||||| |||||| | | | | ||| |||||||||||||| | ||| | | Sbjct 2183803 TGTCGTCACCGTGGATACCAACGGAGACACGCATGAGCATGTGCTGGGGGCGCTC-AGCG 2183745 Query 214348 GTCCTTTGGGGCCCTT---GAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGG 214404 || ||| | | | ||| |||||||||||||| || |||||||| || |||||| Sbjct 2183744 ATC--TTGCCGTCGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCCGAAGTAGT 2183687 Query 214405 AGTAGG 214410 ||||| Sbjct 2183686 TGTAGG 2183681 >seq1 Length=4840925 Score = 343 bits (380), Expect = 3e-89 Identities = 579/827 (70%), Gaps = 22/827 (3%) Strand=Plus/Plus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| |||||||| | ||| |||| | |||||| ||||||||||| ||||||||||| Sbjct 902212 CTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGA 902271 Query 47920 TGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCAGGTGATCCGCGACGTACTCGA 47978 | ||| | ||| | || ||| | | ||||| | |||||||| |||||| Sbjct 902272 CGAGTTCCAGACCT-TCTCGTTGCCAAGGGCGACGAGCAGACGGTCCGCGACAAACTCGA 902330 Query 47979 TGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGA 48038 |||| | ||||||| || ||||||||| ||||| |||||||| | |||| |||| Sbjct 902331 TGTACTGGCACATGAGCTTGGCGTTCATGCCGATGAGCGACACGGGGAGGGCCTCGGTGA 902390 Query 48039 GAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAA-CG---CGGGACTCT 48094 | ||||||| ||| |||| ||||| ||| | |||| || | || |||| | Sbjct 902391 GGAACTCCTGCTCGATCTTGACGGCCTCCTTGATGATCTTGTTGATCGTGTCGGGG---T 902447 Query 48095 GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCT 48154 | ||| | ||| |||||| || |||||| |||||||||||| |||||| ||| Sbjct 902448 GCGGGCG-GCGGCGGAGGTGCGTGA---AGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCC 902503 Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| || ||||||| |||| ||||| ||| || ||||||| || | || ||| Sbjct 902504 TCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTG 902563 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || | |||||| ||||||||||||||||| ||||| || || ||||| ||| Sbjct 902564 AGCCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAAGGCG 902623 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 |||| | ||| ||||| || | || ||| ||||||||| || |||||||| ||| Sbjct 902624 ATGAGGCGCTCGCCGAACGACGAACGCTGGTCCGAGATCCAGCGGAGAGCCCAGTCGGCC 902683 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCG 48394 |||||||||||||| || || ||||| |||||| |||| || | || | | ||| Sbjct 902684 TTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTGGAACAGGTACT---GCCGGCGGGCG 902740 Query 48395 T--CCGC-AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATA 48451 | ||| | || || || ||| | |||| |||| ||||| | ||||| || Sbjct 902741 TTGTCGCGGATGTACGTGTCGATCAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATC 902800 Query 48452 GCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTC 48511 ||||||||| |||||||| | | ||||||| | | ||| || || | |||| | | Sbjct 902801 ATGATCTGGAAGCCGTAGAACGTCTTGGCCTCGGAGATCTGGACCTCACCGCAGAAGCGC 902860 Query 48512 TCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTA 48571 || | || ||||| ||||| || || || || || || ||||| || || || || | Sbjct 902861 TCGACGAGGTTCTCGTTGACGATACCGTCCGACGCGGCGAAGAATGCGAGCACGTGCTCG 902920 Query 48572 AGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGG 48628 | ||| | ||||||||||| | | || || |||| | || | ||| | | ||| Sbjct 902921 ATGAAGTAGCGCTCGTTGTCGTTCAGTTTGTTGTCCCAGTCGTGGAGGTCGGGGGCGAGG 902980 Query 48629 TCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 | | || || | |||||||| || || | || || |||||||| Sbjct 902981 TTGATCTCCTCGGCGGTCCAGAACGAAGCCTGCGCCTTCTTGTACAT 903027 Score = 120 bits (132), Expect = 6e-22 Identities = 298/445 (67%), Gaps = 13/445 (3%) Strand=Plus/Plus Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181 || |||| |||||| ||||| |||||| || ||||| |||||||| ||| |||| ||| Sbjct 1301002 TACAGCAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATAAGCTCGTTCGAG 1301061 Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241 ||| | ||| ||||| || | || || |||||||| ||||| || || || || Sbjct 1301062 AAGGTCAAACCTCCCATGAGGCCGCGCTTCTTCAGCCAGAAGATTGCTGCAAATGACCCC 1301121 Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301 |||||||| ||||||||||| ||||||||| | | | | || | |||| | | Sbjct 1301122 GAGAAGAAAATGCCCTCCACACAGGCGAACGCGATCAAGC-GTATCGG---GAAGGGCAC 1301177 Query 48302 -TTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 | || | ||| | | ||||||||| |||||||||| |||||| || || |||| Sbjct 1301178 ATCATCGGTGATGTACTTCATCGCCCAGTCGGCCTTCTTCTGGATGCAGGGAATGTTCTC 1301237 Query 48361 TATGGCCCGGAA---GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAG 48417 || || ||| || | ||| ||| | ||| ||||| || || ||| Sbjct 1301238 CATTCCCTTGAACAGGAAGTCCTT---CTCGTCCTTGTCTTGCACATATGTCTCGATCAG 1301294 Query 48418 CTTTGCGTACATCTCAGAGTGCACATTCTCTAT-AGCGATCTGGAACCCGTAGAAGGCCC 48476 ||| |||| | ||| || | ||| || | || |||||||| | |||||||| | Sbjct 1301295 GAGGCTGTAGGTCTCGGCGTGAACCTGCTCAATCATCG-TCTGGAACGCATAGAAGGCTC 1301353 Query 48477 TGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCC 48536 || || | ||||||||| |||| |||| | || ||||| ||| || | Sbjct 1301354 GCGCTTCGGCGATCTGCACTTCAGTGGCGAATTGTGAGATGAGGTTCTCTCCGACGATAC 1301413 Query 48537 CATCTGAAGCAGCAAAGAAGGCAAG 48561 |||| || | |||||||| || || Sbjct 1301414 CATCGGATGACGCAAAGAACGCCAG 1301438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532427386880