Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 324 3e-83 seq1 237 3e-57 >seq3 Length=3676950 Score = 324 bits (358), Expect = 3e-83 Identities = 945/1444 (65%), Gaps = 45/1444 (3%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478 ||||||||||||||||||||||| |||||| |||||| || | ||||| | || Sbjct 2184878 AGGGCAGCGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAG-CTGGCGAGCCTCACGCGA 2184820 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||||||||| || || | ||| |||||| || ||||| || |||| ||||| Sbjct 2184819 GTCGAAGGGCATGCGGAGGGCCATGAAGGTGTCGGCGAGACCCTGGACACCGAGACCGAC 2184760 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 ||| | ||| | | |||| || | ||| || || ||||| || ||||| ||| Sbjct 2184759 GGGGCGGTGGCGCATGTTCGAGTTGCGCGCCTCGGGGACGGGGTAGTAGTTGCGAGTGAT 2184700 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658 | | || ||||| | |||| ||| || | |||| |||||||| | Sbjct 2184699 GACCTGGTCAAGGTTGCGGGTGACGACCTTGGTGATCTCGTGCAGCTTCTTG-------- 2184648 Query 221659 CACCAACTCGCCGCCGTCGTGGA---GGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGC 221715 || ||| | ||| ||| | ||| || || || ||||| | ||| Sbjct 2184647 ----AAGTCGTAG--GTCTTGGTCTCGAAGTTG-ACGAAGGCAGGGAGGGCGATCGAGGC 2184595 Query 221716 CAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT 221775 ||||| |||||||| ||||| || | |||| |||||||| || |||||||| Sbjct 2184594 AAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATGATCTCAGTGCAGAGGTT 2184535 Query 221776 GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTA 221835 | |||||||||| || ||||| | || || |||||||| || |||||||||||||| Sbjct 2184534 GGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGGTTCGCAGCGTCCTTGTA 2184475 Query 221836 GAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCT 221895 |||||| |||||||| || ||||| ||||||| | || || | |||||| | ||| Sbjct 2184474 GAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATGGCGAACCAGAGCT-TCT 2184416 Query 221896 G-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGA 221948 | || | | ||| | |||| | |||| |||| | || ||| | Sbjct 2184415 GAGCCTTGATAGTCTTGCGACCCTTGCCGGCACGCTCGTAGCTCTCGTAC---------A 2184365 Query 221949 GCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCA 222008 || | || |||| ||| || | ||| | ||||| || ||| ||| || ||||| | Sbjct 2184364 GCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTCGGCCGGGCACATGA 2184305 Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068 | |||||| || | | ||| | || |||||||||||| | |||||| || || | Sbjct 2184304 GGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGT 2184245 Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128 ||||| || | || || ||||||| |||| ||| || | || || | || | Sbjct 2184244 AGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACGGAGGTCGAGGAAGT 2184185 Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 | || ||||| |||||||| ||||| ||||||| || | || || || |||||||||| Sbjct 2184184 CGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACCCGGGCGCTTGTTGC 2184125 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 ||||||| || || | | ||||| | || || || | || || | |||| Sbjct 2184124 CACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATGGGGACGATACCGT 2184065 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACA 222308 | || |||||||| || |||||||| || ||| | | ||| ||| | Sbjct 2184064 TCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCTTGGCACGGATGTTG-TGGATGTGG 2184006 Query 222309 TG-CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 | |||||||||||||| || |||||| ||| ||| ||||||||||||| |||| Sbjct 2184005 AGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTCTTGAGAGTGTCGTAGATG 2183946 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 || || || ||||||||||| | | | || || |||||||||||||| | | || Sbjct 2183945 CCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGACGACATCTGGGCGTGGGGA 2183886 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487 | || | ||| || || ||||| |||||| || ||||||| | ||| || | | Sbjct 2183885 GTACCCGAGTTGAAGAGAGTGGGCGAGGCGTGGGTGAAGTAGCGCTCGCTCATAAGGTTG 2183826 Query 222488 TACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTAC 222547 || ||||| | ||| | | |||| ||| ||||| || | || | | |||| | Sbjct 2183825 TAGGTCTCAATGACCTTCTCAATGTCGTCACCGTGGATACCAACGGAGACACGCATGAGC 2183766 Query 222548 ATGTACTGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605 |||| |||||| | ||| | || | | | | || ||| ||||| || || | Sbjct 2183765 ATGTGCTGGGGGCGCTCAGC--GATCTTGCCGTCGATGCGGAGGAGGTAGGAGCGCTCGA 2183708 Query 222606 GAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCA 222665 | |||||||| || ||||||||| | ||||||| | | ||| | | |||||||| | Sbjct 2183707 GCGTCTTGAAGCCGAAGTAGTTGTAGGCAAAGTCGCGGTCGTAGATGATCGCGGCGTCAA 2183648 Query 222666 GCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCT 222725 | || ||||| ||| | | | | | | |||||| || | ||| |||| || Sbjct 2183647 GAGCCTCCTTGTTCTTGGAGACGATGTTGTAGACCTCCTCAGAGACCATGGGGGCGTGCT 2183588 Query 222726 CTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCG 222784 || | |||||| |||||||| | | || | | |||||| | || Sbjct 2183587 TGCCAGTCTTGGGGTTGTGCCACTGGTACAGGTCCTCAATCACCTGGGAGAACTGCTTCT 2183528 Query 222785 GGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGG 222844 | |||| ||||||||| ||||| | ||||| || | || | ||| | |||||||| Sbjct 2183527 TG-GTCTCCTTGTGCAGGTTCGAGATAGCGATACGCGCAGCAAGGATGGCCCAGTCAGGG 2183469 Query 222845 TGCA 222848 |||| Sbjct 2183468 TGCA 2183465 >seq1 Length=4840925 Score = 237 bits (262), Expect = 3e-57 Identities = 551/832 (66%), Gaps = 16/832 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||||||||| ||||| | || Sbjct 903036 ATCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTC 902977 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATT--TTC-TCAAG 25593 ||| ||| | ||| |||| || | || ||| | ||| | ||| || || Sbjct 902976 GCCCCCGACCTCCACGACTGGGACAACAAACTGAACGACAACGAGCGCTACTTCATCGAG 902917 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||||| | |||||||| || || || || ||||| || |||||||| || |||| | Sbjct 902916 CACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGAGCGC 902857 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | || || ||| | ||||||||| |||||||| |||||||| || Sbjct 902856 TTCTGCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGATG 902797 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| ||| | ||| ||||| |||||||| ||| | Sbjct 902796 GAGAACATCCACTCGGAGACGTACTC---GCTCCTGATCGACACGTACATCCGCGACAAC 902740 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 ||| | | ||||| ||||||||| ||| ||| ||||||||| |||||| Sbjct 902739 GCCCGCCGGCAGTACCTGTTCCAGGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCC 902680 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||| | |||||| |||| | | |||| |||||||| || | ||| Sbjct 902679 GACTGGGCTCTCCGCTGGATCTCGGACCAGCGTTCGTCGTTCGGCGAGCGCCTCATCGCC 902620 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 || || || || ||||| ||||| ||| || ||||| ||| ||||||||||||||||| Sbjct 902619 TTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCCATCTTCTGGCTCAAG 902560 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || ||||||||| || || || |||||||||||| | |||||||| Sbjct 902559 AAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGACGAGGGC 902500 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAA 26070 || |||| || |||||||||||||||| |||| ||| | | || | || | Sbjct 902499 CTGCACACCGACTTTGCCTGCCTGCTCTTCACG---CACCTCCGCCGCCGCCCGCACCCC 902443 Query 26071 GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130 || || || ||| |||||||| ||||| || |||||||| ||||||| | Sbjct 902442 GACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTCACCGAG 902383 Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190 | ||||||||| || |||||| |||| ||||| |||| | Sbjct 902382 GCCCTCCCCGTGTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTT 902323 Query 26191 GTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || || |||| |||||| || ||| || || || | ||| | || | |||| Sbjct 902322 GTCGCGGACCGTCTGCTCGTCGCC--CTTGGCAACGAGAAGGTCTGGAACTCGTCCAACC 902265 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | |||||||| ||||| | || ||| | | || ||| |||||||||| || Sbjct 902264 CCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 902213 Score = 127 bits (140), Expect = 4e-24 Identities = 224/324 (69%), Gaps = 8/324 (2%) Strand=Plus/Minus Query 25798 ATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGC 25857 || ||| |||| ||| ||||| ||| |||||| ||||| ||||||| |||| | Sbjct 1301240 ATGGAGAACATTCCCTGCATCCAGAAGAAGGCCGACTGGGCGATGAAGTACATCA----C 1301185 Query 25858 CAGAGCGCTACGTTTGGCGAGCGGCTGG-TAGCCTTTGCTGCTGTGGAGGGCATCTTTTT 25916 | | | | || ||| ||| | | || || || |||||||||||| || || Sbjct 1301184 CGATGATGTGCCCTTCCCGATACGCTTGATCGCGTTCGCCTGTGTGGAGGGCATTTTCTT 1301125 Query 25917 CAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTA 25976 | || || ||||| || ||||||||||| ||| || || |||| || || Sbjct 1301124 CTCGGGGTCATTTGCAGCAATCTTCTGGCTGAAGAAGCGCGGCCTCATGGGAGGTTTGAC 1301065 Query 25977 CTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 ||| || |||||||| |||||| | ||||||||||| |||| || || ||||||||||| Sbjct 1301064 CTTCTCGAACGAGCTTATCAGCCGAGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCT 1301005 Query 26037 CTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGA 26096 |||| ||||| | ||||| || || ||| ||| ||| ||| |||| || Sbjct 1301004 GTACA---GCCACCTCAAGCACAAGTGCTCGCAGGAGGAGGTCCACAAGATCGTCAAGGA 1300948 Query 26097 GGCTGTGGAGATCGAGAAGGAGTT 26120 | | |||| |||||||||||||| Sbjct 1300947 GTCGCTGGAAATCGAGAAGGAGTT 1300924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844428462080