Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 seq1 118 1e-21 >seq3 Length=3676950 Score = 143 bits (158), Expect = 3e-29 Identities = 355/535 (66%), Gaps = 9/535 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| ||| | | || |||||||| || |||||||| || Sbjct 2183754 CCCCCAGCACATGCTCATGCGTGTCTCCGTTGGTATCCACGGTGACGACATTGAGAAGGT 2183813 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | | ||||| ||| || ||| | | | |||| ||||| | || || ||||| Sbjct 2183814 CATTGAGACCTACAACCTTATGAGCGAGCGCTACTTCACCCACGCCTCGCCCACTCTCTT 2183873 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| | ||||| || | |||||||| |||||||||| |||||| |||||||| Sbjct 2183874 CAACTCGGGTACTCCCCACGCCCAGATGTCGTCTTGCTTCCTTGTCGCCATGAAGGAGGA 2183933 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| |||| ||||| | ||||| | | ||||| || ||||| ||| || || Sbjct 2183934 CTCGATCGACGGCATCTACGACACTCTCAAGACCTGTGCCCAGATCTCCAAGACTGCCGG 2183993 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 75508 ||||| || | |||||||| | | | |||| | ||||| ||| || || Sbjct 2183994 TGGTATCGGTCTCCACATCCACAACATCCGTGCCA--AGGGCTCGTACATTGCCGGAACC 2184051 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | ||||| | || ||||| || | | |||| || || || || Sbjct 2184052 AACGGCTACTCGAACGGTATCGTCCCCATGCTCCGTGCCTACGACGCTACTGCTCGTTAC 2184111 Query 75569 GTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 || | | || | ||| ||| ||| || |||| |||| | || || ||||| Sbjct 2184112 GTCGA-CCAGGGTGGCAACAAGCGCCCGGGTGCCTTCGCTATCTATCTTGAGCCCTGGCA 2184170 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 ||||| ||| | || ||||| || | || ||||| || | || |||| ||| Sbjct 2184171 CGCCGACATCTTCGACTTCCTCGACCTCCGTAAGAACCACGGAAAGGAGGAGGTTCGTGC 2184230 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 | || ||||| | |||| ||||| | ||||| ||||||||||| || ||| Sbjct 2184231 CCGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 2184285 >seq1 Length=4840925 Score = 118 bits (130), Expect = 1e-21 Identities = 236/342 (69%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 || |||| ||||||||| | || || || || ||||||||||||||||| || || Sbjct 902643 TCGTTCGGCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCG 902584 Query 65128 TTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| ||| | || | ||| | |||||||| || |||||||| ||||| ||||| || Sbjct 902583 TTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAA 902525 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGAC 65246 || || || || || || ||||| || ||| || |||||| |||||||| | Sbjct 902524 CGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCACGCA 902465 Query 65247 TTTGCGTAATAGACC-CACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | || | || ||| |||| || ||| || ||| | || ||||| || ||| Sbjct 902464 CCTCCGCCGCCGCCCGCAC-CCCGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGA 902406 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACT-CCCATGTAATCTCATCGGTATGAACTCTGAG 65364 | ||| | | |||| || || || || ||| ||| |||||||| |||||| | || Sbjct 902405 TCGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTGT-CGCTCATCGGCATGAACGCCAAG 902347 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTC 65406 |||| | ||||||| |||| ||| |||| ||||| ||| Sbjct 902346 CTCATGTGCCAGTACATCGAGTTTGTCGCGGACCGTCTGCTC 902305 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTT 65147 ||||| || ||||||||||| || |||||||| |||||||| ||| || || | ||| | Sbjct 1301153 GCGTTCGCCTGTGTGGAGGGCATTTTCTTCTCGGGGTCATT-TGCAGCAATCTTCTGGCT 1301095 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 ||||||||| || |||||| ||| | |||||| || || ||||| |||||| || Sbjct 1301094 GAAGAAGCGCGGCCTCATGGGAGGTTTGACCTTCTCGAACGAGCTTATCAGCCGAGACGA 1301035 Query 65208 GGGTCTCCAC 65217 |||||| ||| Sbjct 1301034 GGGTCTGCAC 1301025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569361372160