Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 104 7e-17 >seq1 Length=4840925 Score = 104 bits (114), Expect = 7e-17 Identities = 183/264 (69%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 || ||||| | | | | ||| ||||| ||||| | |||||||| || || || || Sbjct 3189659 TCGTAACCGACCTTGAGGTCCTCCATCGCCTTGACGAGTCGACGCTGGATGTATCCCGTC 3189600 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 | || || || || |||||||| ||||| |||| ||||||||||| |||||||| Sbjct 3189599 TCGGCAGTCTTGACCGCAGTATCAATGAGACCTTCACGTCCACCCATAGCGTGGAAGAAG 3189540 Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC 302733 | ||||| ||| || || | || | ||| |||| ||||| ||||| | || || Sbjct 3189539 AACTCTTGCGGGGTAAGACCACGAAGGTACGAGTTCTCGACGAAGCCACGAGATTCCGGT 3189480 Query 302734 GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGATACG 302792 || ||| ||| | || || || || || | || || | | ||| | |||||||| Sbjct 3189479 CCATAGTCATCCTTCGAGAAATGAGGGAGAGTGCGGTGTCGGA-AACCGAAGGGGATACG 3189421 Query 302793 CTTTCCATCAACGTTCTGCTGTCC 302816 ||| || |||||| ||||||| || Sbjct 3189420 CTTACCCTCAACGATCTGCTGACC 3189397 Score = 93.3 bits (102), Expect = 1e-13 Identities = 111/148 (75%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| ||||| || || || |||||||||||||| || | | |||| Sbjct 2478668 CGATTGTCATACGAGACGGAATGGCGTGCGGGTTGATGATGATGTCAGGCGTAATGCCAT 2478609 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTTTGTC 251959 |||| ||||| ||||| ||| |||| | |||| || | ||||| || ||||| || | Sbjct 2478608 CAGCCGTGAACGGCATGTCC---TCCTGGCGATAAGTGATACCAATCGTACCCTTCTGAC 2478552 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| || ||||| ||||| || Sbjct 2478551 CGTGACGCGACGCAAACTTGTCACCGAT 2478524 Score = 84.2 bits (92), Expect = 6e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 251509 CGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGA 251568 || |||||||| ||||||||||||||||| || || | | ||||||| | ||||| || Sbjct 2479002 CGTTCCATTTCTCCGAAACGAAGACCACCGTCACGCGAACGACCCTCGACGGGCTGGCGG 2478943 Query 251569 GTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTG 251628 || ||| | || || || || ||| || ||| || | ||||| |||||| Sbjct 2478942 GTCAGAATCTGCAGCGGTCCACGGGCACGGGCGTGGATCTTGTCGTCGACCATGTGCTTG 2478883 Query 251629 AGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 |||||||||||| | | ||| |||| | ||| Sbjct 2478882 AGACGCTGGTAGTACGTGGGGCCGAAGTAGA 2478852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816996554784