Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq9 129 5e-25 seq2 82.4 7e-11 >seq9 Length=896563 Score = 129 bits (142), Expect = 5e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||| || |||| || |||||||||||||| || Sbjct 20923 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTGCGACCGTCCTCAAGCTGCTTACCCGCGAA 20864 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||| || Sbjct 20863 GATAAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCA-CGT 20805 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| || || ||||| | || ||||| |||||||||| ||| || | Sbjct 20804 TGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTAATCGTCTTACCCGTCAGAGTCTTGA 20745 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 20744 CGAAGATCTGCAT 20732 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| || | |||| |||||| || |||||||| || | | || || | || || Sbjct 21168 ACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTACGTCCATCCTCG 21109 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| |||| ||||||||||| | ||| | | |||||||||| Sbjct 21108 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGA 21049 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||| | |||| | | ||||| ||| || ||||||| ||||||||| || Sbjct 21048 ATCTTGGACTTGA-CGTTGTCGATGGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTT 20990 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | || |||||||| |||||||| Sbjct 20989 ACCCGTGAGGGTCTTCACAAAGATCTGCAT 20960 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| || || ||||| || ||||| Sbjct 20695 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCGAGTTGCTTGCCGGCAAA 20636 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| ||||| ||| | || Sbjct 20635 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 20577 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||||| || || || || | ||| || | Sbjct 20576 TGTCGATCGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTAAGAGTCTTGA 20517 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 20516 CAAAGATCTGCAT 20504 >seq2 Length=4481979 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 720174 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 720115 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||| | |||| || |||||||||| |||||| Sbjct 720114 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 720067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793419682560